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CHARMM (Serbo-Croatian Wikipedia)

Analysis of information sources in references of the Wikipedia article "CHARMM" in Serbo-Croatian language version.

Last modified:

Ref.Un. Ref.Website
Global rank Serbo-Croatian rank
88doi.org
2nd place
5th place
11umaryland.edu
low place
low place

doi.org (Global: 2nd place; Serbo-Croatian: 5th place)

dx.doi.org

  • Brooks BR, Bruccoleri RE, Olafson BD, States DJ, Swaminathan S, Karplus M (1983). „CHARMM: A program for macromolecular energy, minimization, and dynamics calculations”. J Comp Chem 4: 187–217. DOI:10.1002/jcc.540040211.
  • MacKerell, Jr. AD, et al. (1998). „All-atom empirical potential for molecular modeling and dynamics studies of proteins”. J Phys Chem B 102: 3586–3616. DOI:10.1021/jp973084f.
  • MacKerell, Jr. AD, Feig M, Brooks, III CL (2004). „Extending the treatment of backbone energetics in protein force fields: limitations of gas-phase quantum mechanics in reproducing protein conformational distributions in molecular dynamics simulations”. J Comput Chem 25: 1400–1415. DOI:10.1002/jcc.20065.
  • Brooks CL, Chen J, Im W (2006). „Balancing solvation and intramolecular interactions: toward a consistent generalized born force field (CMAP opt. for GBSW)”. J Am Chem Soc 128: 3728–3736. DOI:10.1021/ja057216r.
  • MacKerell, Jr. AD, Banavali N, Foloppe N (2001). „Development and current status of the CHARMM force field for nucleic acids”. Biopolymers 56: 257–265. DOI:10.1002/1097-0282(2000)56:4<257::AID-BIP10029>3.0.CO;2-W.
  • K. Vanommeslaeghe, E. Hatcher, C. Acharya, S. Kundu, S. Zhong, J. Shim, E. Darian, O. Guvench, P. Lopes, I. Vorobyov, A. D. Mackerell Jr. * (2009). „CHARMM general force field: A force field for drug-like molecules compatible with the CHARMM all-atom additive biological force fields”. J Comput Chem. DOI:10.1002/jcc.21367.
  • Patel, S.; MacKerell, Jr. AD; Brooks III, Charles L (2004). „CHARMM fluctuating charge force field for proteins: I parameterization and application to bulk organic liquid simulations”. J Comput Chem 25: 1–15. DOI:10.1002/jcc.10355.
  • Patel, S.; MacKerell, Jr. AD; Brooks III, Charles L (2004). „CHARMM fluctuating charge force field for proteins: II protein/solvent properties from molecular dynamics simulations using a nonadditive electrostatic model”. J Comput Chem 25: 1504–1514. DOI:10.1002/jcc.20077.

umaryland.edu (Global: low place; Serbo-Croatian: low place)

mackerell.umaryland.edu