References analysis of the Wikipedia article "Sekundárna štruktúra bielkovín" in the Slovak version

doi.org

dx.doi.org

Kaj Ulrik Linderstrøm-Lang (1896–1959). Protein Sci., 1997, s. 1092–100. DOI: 10.1002/pro.5560060516. PMID 9144781.

NARWANI, Tarun; CRAVEUR, Pierrick; SHINADA, Nicolas. Dynamics and deformability of α-, 310- and π-helices. Archives of Biological Sciences, 2018, roč. 70, čís. 1, s. 21–31. Dostupné online [cit. 2022-09-17]. ISSN 0354-4664. DOI: 10.2298/ABS170215022N. (po anglicky)

IMAI, Kenichiro; MITAKU, Shigeki. Mechanisms of secondary structure breakers in soluble proteins. Biophysics, 2005-10-19, roč. 1, s. 55–65. PMID: 27857553 PMCID: PMC5036629. Dostupné online [cit. 2022-09-17]. ISSN 1349-2942. DOI: 10.2142/biophysics.1.55.

LEIRO, V.; MORENO, P. M.; SARMENTO, B.. 1 - Design and preparation of biomimetic and bioinspired materials. [s.l.] : Woodhead Publishing, 2017-01-01. DOI: 10.1016/B978-0-08-100741-9.00001-2. Dostupné online. ISBN 978-0-08-100741-9. DOI:10.1016/b978-0-08-100741-9.00001-2 S. 10. (po anglicky)

Secondary structure and rigidity in model proteins. Soft Matter, October 2013, s. 9548–56. DOI: 10.1039/C3SM50807B. PMID 26029761.

Rigidity, secondary structure, and the universality of the boson peak in proteins. Biophysical Journal, June 2014, s. 2667–74. DOI: 10.1016/j.bpj.2014.05.009. PMID 24940784.

Coherent neutron scattering and collective dynamics in the protein, GFP. Biophys. J., 2013, s. 2182–87. DOI: 10.1016/j.bpj.2013.09.029. PMID 24209864.

Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features. Biopolymers, Dec 1983, s. 2577–637. DOI: 10.1002/bip.360221211. PMID 6667333.

Identification of structural motifs from protein coordinate data: secondary structure and first-level supersecondary structure. Proteins, 1988, s. 71–84. DOI: 10.1002/prot.340030202. PMID 3399495.

Knowledge-based protein secondary structure assignment. Proteins, Dec 1995, s. 566–79. Dostupné online. DOI: 10.1002/prot.340230412. PMID 8749853. Archivované 2010-06-13 na Wayback Machine

ScrewFit: combining localization and description of protein secondary structure. Acta Crystallographica Section D, December 2012, s. 1690–3. DOI: 10.1107/s0907444912039029. PMID 23151634.

Minimum message length inference of secondary structure from protein coordinate data. Bioinformatics, Jun 2012, s. i97–i105. DOI: 10.1093/bioinformatics/bts223. PMID 22689785.

KABSCH, Wolfgang; SANDER, Christian. Dictionary of protein secondary structure: Pattern recognition of hydrogen-bonded and geometrical features. Biopolymers, 1983-12, roč. 22, čís. 12, s. 2577–2637. Dostupné online [cit. 2022-09-17]. ISSN 0006-3525. DOI: 10.1002/bip.360221211. (po anglicky)

Spectroscopic methods for analysis of protein secondary structure. Anal. Biochem., 2000, s. 167–76. DOI: 10.1006/abio.1999.4320. PMID 10625503.

GREENFIELD, Norma J.. Using circular dichroism spectra to estimate protein secondary structure. Nature protocols, 2006, roč. 1, čís. 6, s. 2876–2890. PMID: 17406547 PMCID: PMC2728378. Dostupné online [cit. 2022-09-17]. ISSN 1754-2189. DOI: 10.1038/nprot.2006.202.

Rapid protein fold determination using unassigned NMR data. Proc. Natl. Acad. Sci. U.S.A., 2003, s. 15404–09. DOI: 10.1073/pnas.2434121100. PMID 14668443.

Prediction of protein conformation. Biochemistry, Jan 1974, s. 222–45. DOI: 10.1021/bi00699a002. PMID 4358940.

Empirical predictions of protein conformation. Annual Review of Biochemistry, 1978, s. 251–76. DOI: 10.1146/annurev.bi.47.070178.001343. PMID 354496.

Advances in Enzymology and Related Areas of Molecular Biology. [s.l.] : [s.n.], 1978. ISBN 9780470122921. DOI:10.1002/9780470122921.ch2 Prediction of the secondary structure of proteins from their amino acid sequence, s. 45–148.

Analysis of the accuracy and implications of simple methods for predicting the secondary structure of globular proteins. Journal of Molecular Biology, March 1978, s. 97–120. DOI: 10.1016/0022-2836(78)90297-8. PMID 642007.

How good are predictions of protein secondary structure?. FEBS Letters, May 1983, s. 179–82. DOI: 10.1016/0014-5793(82)80597-8. PMID 6852232.

Integrating protein secondary structure prediction and multiple sequence alignment. Current Protein & Peptide Science, Aug 2004, s. 249–66. DOI: 10.2174/1389203043379675. PMID 15320732.

Data Mining Techniques for the Life Sciences. [s.l.] : [s.n.], 2010. ISBN 978-1-60327-240-7. DOI:10.1007/978-1-60327-241-4_19 Protein secondary structure prediction, s. 327–48.

SAM-T08, HMM-based protein structure prediction. Nucleic Acids Res., 2009, s. W492–97. DOI: 10.1093/nar/gkp403. PMID 19483096.

Porter: a new, accurate server for protein secondary structure prediction. Bioinformatics, 2005, s. 1719–20. DOI: 10.1093/bioinformatics/bti203. PMID 15585524.

PredictProtein—an open resource for online prediction of protein structural and functional features. Nucleic Acids Res., 2014, s. W337–43. DOI: 10.1093/nar/gku366. PMID 24799431.

Combining prediction of secondary structure and solvent accessibility in proteins. Proteins, 2005, s. 467–75. DOI: 10.1002/prot.20441. PMID 15768403.

The effect of long-range interactions on the secondary structure formation of proteins. Protein Science, Aug 2005, s. 1955–963. DOI: 10.1110/ps.051479505. PMID 15987894.

Structural classification of thioredoxin-like fold proteins. Proteins, 2005, s. 376–88. Dostupné online. DOI: 10.1002/prot.20329. PMID 15558583.

Alpha helices are more robust to mutations than beta strands. PLOS Computational Biology, 2016, s. e1005242. DOI: 10.1371/journal.pcbi.1005242. PMID 27935949.

Global analysis of protein folding using massively parallel design, synthesis, and testing. Science, 2017, s. 168–175. DOI: 10.1126/science.aan0693. PMID 28706065.

nih.gov

ncbi.nlm.nih.gov