CHARMM (Serbian Wikipedia)

Analysis of information sources in references of the Wikipedia article "CHARMM" in Serbian language version.

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doi.org (Global: 2nd place; Serbian: 5th place)

  • MacKerell, Jr. AD; et al. (1998). „All-atom empirical potential for molecular modeling and dynamics studies of proteins”. J Phys Chem B. 102: 3586—3616. doi:10.1021/jp973084f. 
  • MacKerell, Jr. AD; Feig M; Brooks, III CL (2004). „Extending the treatment of backbone energetics in protein force fields: limitations of gas-phase quantum mechanics in reproducing protein conformational distributions in molecular dynamics simulations”. J Comput Chem. 25: 1400—1415. doi:10.1002/jcc.20065. 
  • Brooks CL, Chen J, Im W (2006). „Balancing solvation and intramolecular interactions: toward a consistent generalized born force field (CMAP opt. for GBSW)”. J Am Chem Soc. 128: 3728—3736. doi:10.1021/ja057216r. 
  • MacKerell, Jr. AD; Banavali N; Foloppe N (2001). „Development and current status of the CHARMM force field for nucleic acids”. Biopolymers. 56: 257—265. doi:10.1002/1097-0282(2000)56:4<257::AID-BIP10029>3.0.CO;2-W. 
  • K. Vanommeslaeghe; E. Hatcher; et al. (2009). „CHARMM general force field: A force field for drug-like molecules compatible with the CHARMM all-atom additive biological force fields”. J Comput Chem. doi:10.1002/jcc.21367. 
  • Patel, S.; MacKerell, Jr. AD; Brooks III, Charles L (2004). „CHARMM fluctuating charge force field for proteins: I parameterization and application to bulk organic liquid simulations”. J Comput Chem. 25: 1—15. doi:10.1002/jcc.10355. 
  • Patel, S.; MacKerell, Jr. AD; Brooks III, Charles L (2004). „CHARMM fluctuating charge force field for proteins: II protein/solvent properties from molecular dynamics simulations using a nonadditive electrostatic model”. J Comput Chem. 25: 1504—1514. doi:10.1002/jcc.20077. 

umaryland.edu (Global: low place; Serbian: low place)

mackerell.umaryland.edu