РНК-інтерференція (Ukrainian Wikipedia)

Fire A, Xu S, Montgomery M, Kostas S, Driver S, Mello C (1998). Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans. Nature. 391 (6669): 806—11. doi:10.1038/35888. PMID 9486653.
Matzke MA, Matzke AJM. (2004). Planting the Seeds of a New Paradigm. PLoS Biol. 2 (5): e133. doi:10.1371/journal.pbio.0020133. PMID 15138502.{{cite journal}}: Обслуговування CS1: Сторінки із непозначеним DOI з безкоштовним доступом (посилання)
Ecker JR, Davis RW (1986). Inhibition of gene expression in plant cells by expression of antisense RNA. Proc Natl Acad Sci USA. 83 (15): 5372—5376. doi:10.1073/pnas.83.15.5372. PMC 386288. PMID 16593734.
Napoli C, Lemieux C, Jorgensen R (1990). Introduction of a Chimeric Chalcone Synthase Gene into Petunia Results in Reversible Co-Suppression of Homologous Genes in trans. Plant Cell. 2 (4): 279—289. doi:10.1105/tpc.2.4.279. PMC 159885. PMID 12354959.
Romano N, Macino G (1992). Quelling: transient inactivation of gene expression in Neurospora crassa by transformation with homologous sequences. Mol Microbiol. 6 (22): 3343—53. doi:10.1111/j.1365-2958.1992.tb02202.x. PMID 1484489.
Ratcliff F, Harrison B, Baulcombe D (1997). A Similarity Between Viral Defense and Gene Silencing in Plants. Science. 276 (5318): 1558—60. doi:10.1126/science.276.5318.1558. PMID 18610513.
Macrae I, Zhou K, Li F, Repic A, Brooks A, Cande W, Adams P, Doudna J (2006). Structural basis for double-stranded RNA processing by dicer. Science. 311 (5758): 195—8. doi:10.1126/science.1121638. PMID 16410517.
Bagasra O, Prilliman KR (2004). RNA interference: the molecular immune system (PDF). J. Mol. Histol. 35 (6): 545—53. doi:10.1007/s10735-004-2192-8. PMID 15614608.
Bernstein E, Caudy A, Hammond S, Hannon G (2001). Role for a bidentate ribonuclease in the initiation step of RNA interference. Nature. 409 (6818): 363—6. doi:10.1038/35053110. PMID 11201747.
Pillai RS, Bhattacharyya SN, Filipowicz W (2007). Repression of protein synthesis by miRNAs: how many mechanisms?. Trends Cell Biol. 17 (3): 118—26. doi:10.1016/j.tcb.2006.12.007. PMID 17197185.
Wang QL, Li ZH (2007). The functions of microRNAs in plants. Front. Biosci. 12: 3975—82. PMID 17485351.
Zhao Y, Srivastava D (2007). A developmental view of microRNA function. Trends Biochem. Sci. 32 (4): 189—97. doi:10.1016/j.tibs.2007.02.006. PMID 17350266.
Lee Y, Nakahara K, Pham J, Kim K, He Z, Sontheimer E, Carthew R (2004). Distinct roles for Drosophila Dicer-1 and Dicer-2 in the siRNA/miRNA silencing pathways. Cell. 117 (1): 69—81. doi:10.1016/S0092-8674(04)00261-2. PMID 15066283.
Gregory R, Chendrimada T, Shiekhattar R (2006). MicroRNA biogenesis: isolation and characterization of the microprocessor complex. Methods Mol Biol. 342: 33—47. doi:10.1385/1-59745-123-1:33. PMID 16957365.
Gregory R, Chendrimada T, Cooch N, Shiekhattar R (2005). Human RISC couples microRNA biogenesis and posttranscriptional gene silencing. Cell. 123 (4): 631—40. doi:10.1016/j.cell.2005.10.022. PMID 16271387.
Matranga C, Tomari Y, Shin C, Bartel D, Zamore P (2005). Passenger-strand cleavage facilitates assembly of siRNA into Ago2-containing RNAi enzyme complexes. Cell. 123 (4): 607—20. doi:10.1016/j.cell.2005.08.044. PMID 16271386.
Leuschner P, Ameres S, Kueng S, Martinez J (2006). Cleavage of the siRNA passenger strand during RISC assembly in human cells. EMBO Rep. 7 (3): 314—20. doi:10.1038/sj.embor.7400637. PMC 1456892. PMID 16439995.
Schwarz DS, Hutvágner G, Du T, Xu Z, Aronin N, Zamore PD (2003). Asymmetry in the assembly of the RNAi enzyme complex. Cell. 115 (2): 199—208. doi:10.1016/S0092-8674(03)00759-1. PMID 14567917.
Preall J, He Z, Gorra J, Sontheimer E (2006). Short interfering RNA strand selection is independent of dsRNA processing polarity during RNAi in Drosophila. Curr Biol. 16 (5): 530—5. doi:10.1016/j.cub.2006.01.061. PMID 16527750.
Tomari Y, Matranga C, Haley B, Martinez N, Zamore P (2004). A protein sensor for siRNA asymmetry. Science. 306 (5700): 1377—80. doi:10.1126/science.1102755. PMID 15550672.
Ma J, Yuan Y, Meister G, Pei Y, Tuschl T, Patel D (2005). Structural basis for 5'-end-specific recognition of guide RNA by the A. fulgidus Piwi protein. Nature. 434 (7033): 666—70. doi:10.1038/nature03514. PMID 15800629.
Sen G, Wehrman T, Blau H (2005). mRNA translation is not a prerequisite for small interfering RNA-mediated mRNA cleavage. Differentiation. 73 (6): 287—93. doi:10.1111/j.1432-0436.2005.00029.x. PMID 16138829.
Gu S, Rossi J (2005). Uncoupling of RNAi from active translation in mammalian cells. RNA. 11 (1): 38—44. doi:10.1261/rna.7158605. PMC 1370689. PMID 15574516.
Sen G, Blau H (2005). Argonaute 2/RISC resides in sites of mammalian mRNA decay known as cytoplasmic bodies. Nat Cell Biol. 7 (6): 633—6. doi:10.1038/ncb1265. PMID 15908945.
Jakymiw A, Lian S, Eystathioy T, Li S, Satoh M, Hamel J, Fritzler M, Chan E (2005). Disruption of P bodies impairs mammalian RNA interference. Nat Cell Biol. 7 (12): 1267—74. doi:10.1038/ncb1334. PMID 16284622.
Verdel A, Jia S, Gerber S, Sugiyama T, Gygi S, Grewal S, Moazed D (2004). RNAi-mediated targeting of heterochromatin by the RITS complex. Science. 303 (5658): 672—6. doi:10.1126/science.1093686. PMID 14704433.
Irvine D, Zaratiegui M, Tolia N, Goto D, Chitwood D, Vaughn M, Joshua-Tor L, Martienssen R (2006). Argonaute slicing is required for heterochromatic silencing and spreading. Science. 313 (5790): 1134—7. doi:10.1126/science.1128813. PMID 16931764.
Noma K, Sugiyama T, Cam H, Verdel A, Zofall M, Jia S, Moazed D, Grewal S (2004). RITS acts in cis to promote RNA interference-mediated transcriptional and post-transcriptional silencing. Nat Genet. 36 (11): 1174—80. doi:10.1038/ng1452. PMID 15475954.
Volpe T, Kidner C, Hall I, Teng G, Grewal S, Martienssen R (2002). Regulation of heterochromatic silencing and histone H3 lysine-9 methylation by RNAi. Science. 297 (5588): 1833—7. doi:10.1126/science.1074973. PMID 12193640.
Volpe T, Schramke V, Hamilton G, White S, Teng G, Martienssen R, Allshire R (2003). RNA interference is required for normal centromere function in fission yeast. Chromosome Res. 11 (2): 137—46. doi:10.1023/A:1022815931524. PMID 12733640.
Sugiyama T, Cam H, Verdel A, Moazed D, Grewal S (2005). RNA-dependent RNA polymerase is an essential component of a self-enforcing loop coupling heterochromatin assembly to siRNA production. Proc Natl Acad Sci USA. 102 (1): 152—7. doi:10.1073/pnas.0407641102. PMC 544066. PMID 15615848.
Wang F, Koyama N, Nishida H, Haraguchi T, Reith W, Tsukamoto T (2006). The assembly and maintenance of heterochromatin initiated by transgene repeats are independent of the RNA interference pathway in mammalian cells. Mol Cell Biol. 26 (11): 4028—40. doi:10.1128/MCB.02189-05. PMC 1489094. PMID 16705157.
Bass B (2002). RNA editing by adenosine deaminases that act on RNA. Annu Rev Biochem. 71: 817—46. doi:10.1146/annurev.biochem.71.110601.135501. PMC 1823043. PMID 12045112.
Bass B (2000). Double-stranded RNA as a template for gene silencing. Cell. 101 (3): 235—8. doi:10.1016/S0092-8674(02)71133-1. PMID 10847677.
Luciano D, Mirsky H, Vendetti N, Maas S (2004). RNA editing of a miRNA precursor. RNA. 10 (8): 1174—7. doi:10.1261/rna.7350304. PMC 1370607. PMID 15272117.
Yang W, Chendrimada T, Wang Q, Higuchi M, Seeburg P, Shiekhattar R, Nishikura K (2006). Modulation of microRNA processing and expression through RNA editing by ADAR deaminases. Nat Struct Mol Biol. 13 (1): 13—21. doi:10.1038/nsmb1041. PMC 2950615. PMID 16369484.
Yang W, Wang Q, Howell K, Lee J, Cho D, Murray J, Nishikura K (2005). ADAR1 RNA deaminase limits short interfering RNA efficacy in mammalian cells. J Biol Chem. 280 (5): 3946—53. doi:10.1074/jbc.M407876200. PMC 2947832. PMID 15556947.{{cite journal}}: Обслуговування CS1: Сторінки із непозначеним DOI з безкоштовним доступом (посилання)
Nishikura K (2006). Editor meets silencer: crosstalk between RNA editing and RNA interference. Nat Rev Mol Cell Biol. 7 (12): 919—31. doi:10.1038/nrm2061. PMC 2953463. PMID 17139332.
Saumet A, Lecellier CH (2006). Anti-viral RNA silencing: do we look like plants?. Retrovirology. 3 (3): 3. doi:10.1186/1742-4690-3-3. PMC 1363733. PMID 16409629.{{cite journal}}: Обслуговування CS1: Сторінки із непозначеним DOI з безкоштовним доступом (посилання)
Hannon GL (2002). RNA interference. Nature. 418: 244—51. PMID 12110901.
Jones L, Ratcliff F, Baulcombe DC (2001). RNA-directed transcriptional gene silencing in plants can be inherited independently of the RNA trigger and requires Met1 for maintenance. Current Biology. 11 (10): 747—757. doi:10.1016/S0960-9822(01)00226-3. PMID 11378384.
Humphreys DT, Westman BJ, Martin DI, Preiss T (2005). MicroRNAs control translation initiation by inhibiting eukaryotic initiation factor 4E/cap and poly(A) tail function. Proc Natl Acad Sci USA. 102 (47): 16961—16966. doi:10.1073/pnas.0506482102. PMC 1287990. PMID 16287976.
DaRocha W, Otsu K, Teixeira S, Donelson J (2004). Tests of cytoplasmic RNA interference (RNAi) and construction of a tetracycline-inducible T7 promoter system in Trypanosoma cruzi. Mol Biochem Parasitol. 133 (2): 175—86. doi:10.1016/j.molbiopara.2003.10.005. PMID 14698430.
Robinson K, Beverley S (2003). Improvements in transfection efficiency and tests of RNA interference (RNAi) approaches in the protozoan parasite Leishmania. Mol Biochem Parasitol. 128 (2): 217—28. doi:10.1016/S0166-6851(03)00079-3. PMID 12742588.
L. Aravind, Hidemi Watanabe, David J. Lipman, and Eugene V. Koonin (2000). Lineage-specific loss and divergence of functionally linked genes in eukaryotes. Proceedings of the National Academy of Sciences. 97 (21): 11319—11324. doi:10.1073/pnas.200346997. PMC 17198. PMID 11016957.
Drinnenberg IA, Weinberg DE, Xie KT, Nower JP, Wolfe KH, Fink GR, Bartel DP (2009). RNAi in Budding Yeast. Science. 326 (5952): 544—50. doi:10.1126/science.1176945. PMID 19745116.
Nakayashiki H, Kadotani N, Mayama S (2006). Evolution and diversification of RNA silencing proteins in fungi. J Mol Evol. 63 (1): 127—35. doi:10.1007/s00239-005-0257-2. PMID 16786437.
Morita T, Mochizuki Y, Aiba H (2006). Translational repression is sufficient for gene silencing by bacterial small noncoding RNAs in the absence of mRNA destruction. Proc Natl Acad Sci USA. 103 (13): 4858—63. doi:10.1073/pnas.0509638103. PMC 1458760. PMID 16549791.
Makarova K, Grishin N, Shabalina S, Wolf Y, Koonin E (2006). A putative RNA-interference-based immune system in prokaryotes: computational analysis of the predicted enzymatic machinery, functional analogies with eukaryotic RNAi, and hypothetical mechanisms of action. Biol Direct. 1: 7. doi:10.1186/1745-6150-1-7. PMC 1462988. PMID 16545108.{{cite journal}}: Обслуговування CS1: Сторінки із непозначеним DOI з безкоштовним доступом (посилання)
Stram Y, Kuzntzova L (2006). Inhibition of viruses by RNA interference. Virus Genes. 32 (3): 299—306. doi:10.1007/s11262-005-6914-0. PMID 16732482.
Blevins T, Rajeswaran R, Shivaprasad P, Beknazariants D, Si-Ammour A, Park H, Vazquez F, Robertson D, Meins F, Hohn T, Pooggin M (2006). Four plant Dicers mediate viral small RNA biogenesis and DNA virus induced silencing. Nucleic Acids Res. 34 (21): 6233—46. doi:10.1093/nar/gkl886. PMC 1669714. PMID 17090584.
Palauqui J, Elmayan T, Pollien J, Vaucheret H (1997). Systemic acquired silencing: transgene-specific post-transcriptional silencing is transmitted by grafting from silenced stocks to non-silenced scions. EMBO J. 16 (15): 4738—45. doi:10.1093/emboj/16.15.4738. PMC 1170100. PMID 9303318.
Lucy A, Guo H, Li W, Ding S (2000). Suppression of post-transcriptional gene silencing by a plant viral protein localized in the nucleus. EMBO J. 19 (7): 1672—80. doi:10.1093/emboj/19.7.1672. PMC 310235. PMID 10747034.
Mérai Z, Kerényi Z, Kertész S, Magna M, Lakatos L, Silhavy D (2006). Double-stranded RNA binding may be a general plant RNA viral strategy to suppress RNA silencing. J Virol. 80 (12): 5747—56. doi:10.1128/JVI.01963-05. PMC 1472586. PMID 16731914.
Katiyar-Agarwal S, Morgan R, Dahlbeck D, Borsani O, Villegas A, Zhu J, Staskawicz B, Jin H (2006). A pathogen-inducible endogenous siRNA in plant immunity. Proc Natl Acad Sci USA. 103 (47): 18002—7. doi:10.1073/pnas.0608258103. PMC 1693862. PMID 17071740.
Fritz J, Girardin S, Philpott D (2006). Innate immune defense through RNA interference. Sci STKE. 2006 (339): pe27. doi:10.1126/stke.3392006pe27. PMID 16772641.
Zambon R, Vakharia V, Wu L (2006). RNAi is an antiviral immune response against a dsRNA virus in Drosophila melanogaster. Cell Microbiol. 8 (5): 880—9. doi:10.1111/j.1462-5822.2006.00688.x. PMID 16611236.
Wang X, Aliyari R, Li W, Li H, Kim K, Carthew R, Atkinson P, Ding S (2006). RNA interference directs innate immunity against viruses in adult Drosophila. Science. 312 (5772): 452—4. doi:10.1126/science.1125694. PMC 1509097. PMID 16556799.
Lu R, Maduro M, Li F, Li H, Broitman-Maduro G, Li W, Ding S (2005). Animal virus replication and RNAi-mediated antiviral silencing in Caenorhabditis elegans. Nature. 436 (7053): 1040—3. doi:10.1038/nature03870. PMC 1388260. PMID 16107851.
Wilkins C, Dishongh R, Moore S, Whitt M, Chow M, Machaca K (2005). RNA interference is an antiviral defence mechanism in Caenorhabditis elegans. Nature. 436 (7053): 1044—7. doi:10.1038/nature03957. PMID 16107852.
Berkhout B, Haasnoot J (2006). The interplay between virus infection and the cellular RNA interference machinery. FEBS Lett. 580 (12): 2896—902. doi:10.1016/j.febslet.2006.02.070. PMID 16563388.
Schütz S, Sarnow P (2006). Interaction of viruses with the mammalian RNA interference pathway. Virology. 344 (1): 151—7. doi:10.1016/j.virol.2005.09.034. PMID 16364746.
Cullen B (2006). Is RNA interference involved in intrinsic antiviral immunity in mammals?. Nat Immunol. 7 (6): 563—7. doi:10.1038/ni1352. PMID 16715068.
Li H, Ding S (2005). Antiviral silencing in animals. FEBS Lett. 579 (26): 5965—73. doi:10.1016/j.febslet.2005.08.034. PMC 1350842. PMID 16154568.
Carrington J, Ambros V (2003). Role of microRNAs in plant and animal development. Science. 301 (5631): 336—8. doi:10.1126/science.1085242. PMID 12869753.
Lee R, Feinbaum R, Ambros V (1993). The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14. Cell. 75 (5): 843—54. doi:10.1016/0092-8674(93)90529-Y. PMID 8252621.
Palatnik J, Allen E, Wu X, Schommer C, Schwab R, Carrington J, Weigel D (2003). Control of leaf morphogenesis by microRNAs. Nature. 425 (6955): 257—63. doi:10.1038/nature01958. PMID 12931144.
Zhang B, Pan X, Cobb G, Anderson T (2006). Plant microRNA: a small regulatory molecule with big impact. Dev Biol. 289 (1): 3—16. doi:10.1016/j.ydbio.2005.10.036. PMID 16325172.
Jones-Rhoades M, Bartel D, Bartel B (2006). MicroRNAS and their regulatory roles in plants. Annu Rev Plant Biol. 57: 19—53. doi:10.1146/annurev.arplant.57.032905.105218. PMID 16669754.
Zhang B, Pan X, Cobb G, Anderson T (2007). microRNAs as oncogenes and tumor suppressors. Dev Biol. 302 (1): 1—12. doi:10.1016/j.ydbio.2006.08.028. PMID 16989803.
Check E (2007). RNA interference: hitting the on switch. Nature. 448 (7156): 855—858. doi:10.1038/448855a. PMID 17713502.
Li LC, Okino ST, Zhao H та ін. (2006). Small dsRNAs induce transcriptional activation in human cells. Proc. Natl. Acad. Sci. U.S.A. 103 (46): 17337—42. doi:10.1073/pnas.0607015103. PMC 1859931. PMID 17085592. {{cite journal}}: Явне використання «та ін.» у: |author= (довідка)
Cerutti H, Casas-Mollano J (2006). On the origin and functions of RNA-mediated silencing: from protists to man. Curr Genet. 50 (2): 81—99. doi:10.1007/s00294-006-0078-x. PMC 2583075. PMID 16691418.
Buchon N, Vaury C (2006). RNAi: a defensive RNA-silencing against viruses and transposable elements. Heredity. 96 (2): 195—202. doi:10.1038/sj.hdy.6800789. PMID 16369574.
Obbard D, Jiggins F, Halligan D, Little T (2006). Natural selection drives extremely rapid evolution in antiviral RNAi genes. Curr Biol. 16 (6): 580—5. doi:10.1016/j.cub.2006.01.065. PMID 16546082.
Voorhoeve PM, Agami R (2003). Knockdown stands up. Trends Biotechnol. 21 (1): 2—4. doi:10.1016/S0167-7799(02)00002-1. PMID 12480342.
Qiu S, Adema C, Lane T (2005). A computational study of off-target effects of RNA interference. Nucleic Acids Res. 33 (6): 1834—47. doi:10.1093/nar/gki324. PMC 1072799. PMID 15800213.
Naito Y, Yamada T, Matsumiya T, Ui-Tei K, Saigo K, Morishita S (2005). dsCheck: highly sensitive off-target search software for double-stranded RNA-mediated RNA interference. Nucleic Acids Res. 33 (Web Server issue): W589—91. doi:10.1093/nar/gki419. PMC 1160180. PMID 15980542.
Henschel A, Buchholz F, Habermann B (2004). DEQOR: a web-based tool for the design and quality control of siRNAs. Nucleic Acids Res. 32 (Web Server issue): W113—20. doi:10.1093/nar/gkh408. PMC 441546. PMID 15215362.
Naito Y, Yamada T, Ui-Tei K, Morishita S, Saigo K (2004). siDirect: highly effective, target-specific siRNA design software for mammalian RNA interference. Nucleic Acids Res. 32 (Web Server issue): W124—9. doi:10.1093/nar/gkh442. PMC 441580. PMID 15215364.
Naito Y, Ui-Tei K, Nishikawa T, Takebe Y, Saigo K (2006). siVirus: web-based antiviral siRNA design software for highly divergent viral sequences. Nucleic Acids Res. 34 (Web Server issue): W448—50. doi:10.1093/nar/gkl214. PMC 1538817. PMID 16845046.
Reynolds A, Anderson E, Vermeulen A, Fedorov Y, Robinson K, Leake D, Karpilow J, Marshall W, Khvorova A (2006). Induction of the interferon response by siRNA is cell type- and duplex length-dependent. RNA. 12 (6): 988—93. doi:10.1261/rna.2340906. PMC 1464853. PMID 16611941.
Stein P, Zeng F, Pan H, Schultz R (2005). Absence of non-specific effects of RNA interference triggered by long double-stranded RNA in mouse oocytes. Dev Biol. 286 (2): 464—71. doi:10.1016/j.ydbio.2005.08.015. PMID 16154556.
Brummelkamp T, Bernards R, Agami R (2002). A system for stable expression of short interfering RNAs in mammalian cells. Science. 296 (5567): 550—3. doi:10.1126/science.1068999. PMID 11910072.
Tiscornia G, Tergaonkar V, Galimi F, Verma I (2004). CRE recombinase-inducible RNA interference mediated by lentiviral vectors. Proc Natl Acad Sci USA. 101 (19): 7347—51. doi:10.1073/pnas.0402107101. PMC 409921. PMID 15123829.
Ventura A, Meissner A, Dillon C, McManus M, Sharp P, Van Parijs L, Jaenisch R, Jacks T (2004). Cre-lox-regulated conditional RNA interference from transgenes. Proc Natl Acad Sci USA. 101 (28): 10380—5. doi:10.1073/pnas.0403954101. PMC 478580. PMID 15240889.
Brock T, Browse J, Watts J (2006). Genetic regulation of unsaturated fatty acid composition in C. elegans. PLoS Genet. 2 (7): e108. doi:10.1371/journal.pgen.0020108. PMC 1500810. PMID 16839188. Архів оригіналу за 22 лютого 2008. Процитовано 28 квітня 2019.{{cite journal}}: Обслуговування CS1: Сторінки із непозначеним DOI з безкоштовним доступом (посилання)
Kamath R, Ahringer J (2003). Genome-wide RNAi screening in Caenorhabditis elegans. Methods. 30 (4): 313—21. doi:10.1016/S1046-2023(03)00050-1. PMID 12828945.
Boutros M, Kiger A, Armknecht S, Kerr K, Hild M, Koch B, Haas S, Paro R, Perrimon N (2004). Genome-wide RNAi analysis of growth and viability in Drosophila cells. Science. 303 (5659): 832—5. doi:10.1126/science.1091266. PMID 14764878.
Fortunato A, Fraser A (2005). Uncover genetic interactions in Caenorhabditis elegans by RNA interference. Biosci Rep. 25 (5–6): 299—307. doi:10.1007/s10540-005-2892-7. PMID 16307378.
Cullen L, Arndt G (2005). Genome-wide screening for gene function using RNAi in mammalian cells. Immunol Cell Biol. 83 (3): 217—23. doi:10.1111/j.1440-1711.2005.01332.x. PMID 15877598.
Huesken D, Lange J, Mickanin C, Weiler J, Asselbergs F, Warner J, Meloon B, Engel S, Rosenberg A, Cohen D, Labow M, Reinhardt M, Natt F, Hall J (2005). Design of a genome-wide siRNA library using an artificial neural network. Nat Biotechnol. 23 (8): 995—1001. doi:10.1038/nbt1118. PMID 16025102.
Janitz M, Vanhecke D, Lehrach H (2006). High-throughput RNA interference in functional genomics. Handb Exp Pharmacol. 173 (173): 97—104. doi:10.1007/3-540-27262-3_5. PMID 16594612.
Vanhecke D, Janitz M (2005). Functional genomics using high-throughput RNA interference. Drug Discov Today. 10 (3): 205—12. doi:10.1016/S1359-6446(04)03352-5. PMID 15708535.
Geldhof P, Murray L, Couthier A, Gilleard J, McLauchlan G, Knox D, Britton C (2006). Testing the efficacy of RNA interference in Haemonchus contortus. Int J Parasitol. 36 (7): 801—10. doi:10.1016/j.ijpara.2005.12.004. PMID 16469321.
Geldhof P, Visser A, Clark D, Saunders G, Britton C, Gilleard J, Berriman M, Knox D. (2007). RNA interference in parasitic helminths: current situation, potential pitfalls and future prospects. Parasitology. 134 (Pt 5): 1—11. doi:10.1017/S0031182006002071. PMID 17201997.
Travella S, Klimm T, Keller B (2006). RNA interference-based gene silencing as an efficient tool for functional genomics in hexaploid bread wheat. Plant Physiol. 142 (1): 6—20. doi:10.1104/pp.106.084517. PMC 1557595. PMID 16861570.
McGinnis K, Chandler V, Cone K, Kaeppler H, Kaeppler S, Kerschen A, Pikaard C, Richards E, Sidorenko L, Smith T, Springer N, Wulan T (2005). Transgene-induced RNA interference as a tool for plant functional genomics. Methods Enzymol. 392: 1—24. doi:10.1016/S0076-6879(04)92001-0. PMID 15644172.
Paddison P, Caudy A, Hannon G (2002). Stable suppression of gene expression by RNAi in mammalian cells. Proc Natl Acad Sci USA. 99 (3): 1443—8. doi:10.1073/pnas.032652399. PMC 122210. PMID 11818553.
Sah D (2006). Therapeutic potential of RNA interference for neurological disorders. Life Sci. 79 (19): 1773—80. doi:10.1016/j.lfs.2006.06.011. PMID 16815477.
Zender L, Hutker S, Liedtke C, Tillmann H, Zender S, Mundt B, Waltemathe M, Gosling T, Flemming P, Malek N, Trautwein C, Manns M, Kuhnel F, Kubicka S (2003). Caspase 8 small interfering RNA prevents acute liver failure in mice. Proc Natl Acad Sci USA. 100 (13): 7797—802. doi:10.1073/pnas.1330920100. PMC 164667. PMID 12810955.
Jiang M, Milner J (2002). Selective silencing of viral gene expression in HPV-positive human cervical carcinoma cells treated with siRNA, a primer of RNA interference. Oncogene. 21 (39): 6041—8. doi:10.1038/sj.onc.1205878. PMID 12203116.
Crowe S (2003). Suppression of chemokine receptor expression by RNA interference allows for inhibition of HIV-1 replication, by Martínez et al. AIDS. 17 Suppl 4: S103—5. PMID 15080188.
Kusov Y, Kanda T, Palmenberg A, Sgro J, Gauss-Müller V (2006). Silencing of hepatitis A virus infection by small interfering RNAs. J Virol. 80 (11): 5599—610. doi:10.1128/JVI.01773-05. PMC 1472172. PMID 16699041.
Jia F, Zhang Y, Liu C (2006). A retrovirus-based system to stably silence hepatitis B virus genes by RNA interference. Biotechnol Lett. 28 (20): 1679—85. doi:10.1007/s10529-006-9138-z. PMID 16900331.
Li Y, Kong L, Cheng B, Li K (2005). Construction of influenza virus siRNA expression vectors and their inhibitory effects on multiplication of influenza virus. Avian Dis. 49 (4): 562—73. doi:10.1637/7365-041205R2.1. PMID 16405000.
Hu L, Wang Z, Hu C, Liu X, Yao L, Li W, Qi Y (2005). Inhibition of Measles virus multiplication in cell culture by RNA interference. Acta Virol. 49 (4): 227—34. PMID 16402679.
Raoul C, Barker S, Aebischer P (2006). Viral-based modelling and correction of neurodegenerative diseases by RNA interference. Gene Ther. 13 (6): 487—95. doi:10.1038/sj.gt.3302690. PMID 16319945.
Putral L, Gu W, McMillan N (2006). RNA interference for the treatment of cancer. Drug News Perspect. 19 (6): 317—24. doi:10.1358/dnp.2006.19.6.985937. PMID 16971967.
Izquierdo M (2005). Short interfering RNAs as a tool for cancer gene therapy. Cancer Gene Ther. 12 (3): 217—27. doi:10.1038/sj.cgt.7700791. PMID 15550938.
Li C, Parker A, Menocal E, Xiang S, Borodyansky L, Fruehauf J (2006). Delivery of RNA interference. Cell Cycle. 5 (18): 2103—9. doi:10.4161/cc.5.18.3192. PMID 16940756.
Takeshita F, Ochiya T (2006). Therapeutic potential of RNA interference against cancer. Cancer Sci. 97 (8): 689—96. doi:10.1111/j.1349-7006.2006.00234.x. PMID 16863503.
Tong A, Zhang Y, Nemunaitis J (2005). Small interfering RNA for experimental cancer therapy. Curr Opin Mol Ther. 7 (2): 114—24. PMID 15844618.
Grimm D, Streetz K, Jopling C, Storm T, Pandey K, Davis C, Marion P, Salazar F, Kay M (2006). Fatality in mice due to oversaturation of cellular microRNA/short hairpin RNA pathways. Nature. 441 (7092): 537—41. doi:10.1038/nature04791. PMID 16724069.
Sunilkumar G, Campbell L, Puckhaber L, Stipanovic R, Rathore K (2006). Engineering cottonseed for use in human nutrition by tissue-specific reduction of toxic gossypol. Proc Natl Acad Sci USA. 103 (48): 18054—9. doi:10.1073/pnas.0605389103. PMC 1838705. PMID 17110445.
Siritunga D, Sayre R (2003). Generation of cyanogen-free transgenic cassava. Planta. 217 (3): 367—73. doi:10.1007/s00425-003-1005-8. PMID 14520563.
Le L, Lorenz Y, Scheurer S, Fötisch K, Enrique E, Bartra J, Biemelt S, Vieths S, Sonnewald U (2006). Design of tomato fruits with reduced allergenicity by dsRNAi-mediated inhibition of ns-LTP (Lyc e 3) expression. Plant Biotechnol J. 4 (2): 231—42. doi:10.1111/j.1467-7652.2005.00175.x. PMID 17177799.
Gavilano L, Coleman N, Burnley L, Bowman M, Kalengamaliro N, Hayes A, Bush L, Siminszky B (2006). Genetic engineering of Nicotiana tabacum for reduced nornicotine content. J Agric Food Chem. 54 (24): 9071—8. doi:10.1021/jf0610458. PMID 17117792.
Allen R, Millgate A, Chitty J, Thisleton J, Miller J, Fist A, Gerlach W, Larkin P (2004). RNAi-mediated replacement of morphine with the nonnarcotic alkaloid reticuline in opium poppy. Nat Biotechnol. 22 (12): 1559—66. doi:10.1038/nbt1033. PMID 15543134.
Zadeh A, Foster G (2004). Transgenic resistance to tobacco ringspot virus. Acta Virol. 48 (3): 145—52. PMID 15595207.
Niggeweg R, Michael A, Martin C (2004). Engineering plants with increased levels of the antioxidant chlorogenic acid. Nat Biotechnol. 22 (6): 746—54. doi:10.1038/nbt966. PMID 15107863.
Sanders R, Hiatt W (2005). Tomato transgene structure and silencing. Nat Biotechnol. 23 (3): 287—9. doi:10.1038/nbt0305-287b. PMID 15765076.
Chiang C, Wang J, Jan F, Yeh S, Gonsalves D (2001). Comparative reactions of recombinant papaya ringspot viruses with chimeric coat protein (CP) genes and wild-type viruses on CP-transgenic papaya. J Gen Virol. 82 (Pt 11): 2827—36. PMID 11602796.

ncbi.nlm.nih.gov

Ecker JR, Davis RW (1986). Inhibition of gene expression in plant cells by expression of antisense RNA. Proc Natl Acad Sci USA. 83 (15): 5372—5376. doi:10.1073/pnas.83.15.5372. PMC 386288. PMID 16593734.
Napoli C, Lemieux C, Jorgensen R (1990). Introduction of a Chimeric Chalcone Synthase Gene into Petunia Results in Reversible Co-Suppression of Homologous Genes in trans. Plant Cell. 2 (4): 279—289. doi:10.1105/tpc.2.4.279. PMC 159885. PMID 12354959.
Leuschner P, Ameres S, Kueng S, Martinez J (2006). Cleavage of the siRNA passenger strand during RISC assembly in human cells. EMBO Rep. 7 (3): 314—20. doi:10.1038/sj.embor.7400637. PMC 1456892. PMID 16439995.
Gu S, Rossi J (2005). Uncoupling of RNAi from active translation in mammalian cells. RNA. 11 (1): 38—44. doi:10.1261/rna.7158605. PMC 1370689. PMID 15574516.
Sugiyama T, Cam H, Verdel A, Moazed D, Grewal S (2005). RNA-dependent RNA polymerase is an essential component of a self-enforcing loop coupling heterochromatin assembly to siRNA production. Proc Natl Acad Sci USA. 102 (1): 152—7. doi:10.1073/pnas.0407641102. PMC 544066. PMID 15615848.
Wang F, Koyama N, Nishida H, Haraguchi T, Reith W, Tsukamoto T (2006). The assembly and maintenance of heterochromatin initiated by transgene repeats are independent of the RNA interference pathway in mammalian cells. Mol Cell Biol. 26 (11): 4028—40. doi:10.1128/MCB.02189-05. PMC 1489094. PMID 16705157.
Bass B (2002). RNA editing by adenosine deaminases that act on RNA. Annu Rev Biochem. 71: 817—46. doi:10.1146/annurev.biochem.71.110601.135501. PMC 1823043. PMID 12045112.
Luciano D, Mirsky H, Vendetti N, Maas S (2004). RNA editing of a miRNA precursor. RNA. 10 (8): 1174—7. doi:10.1261/rna.7350304. PMC 1370607. PMID 15272117.
Yang W, Chendrimada T, Wang Q, Higuchi M, Seeburg P, Shiekhattar R, Nishikura K (2006). Modulation of microRNA processing and expression through RNA editing by ADAR deaminases. Nat Struct Mol Biol. 13 (1): 13—21. doi:10.1038/nsmb1041. PMC 2950615. PMID 16369484.
Yang W, Wang Q, Howell K, Lee J, Cho D, Murray J, Nishikura K (2005). ADAR1 RNA deaminase limits short interfering RNA efficacy in mammalian cells. J Biol Chem. 280 (5): 3946—53. doi:10.1074/jbc.M407876200. PMC 2947832. PMID 15556947.{{cite journal}}: Обслуговування CS1: Сторінки із непозначеним DOI з безкоштовним доступом (посилання)
Nishikura K (2006). Editor meets silencer: crosstalk between RNA editing and RNA interference. Nat Rev Mol Cell Biol. 7 (12): 919—31. doi:10.1038/nrm2061. PMC 2953463. PMID 17139332.
Saumet A, Lecellier CH (2006). Anti-viral RNA silencing: do we look like plants?. Retrovirology. 3 (3): 3. doi:10.1186/1742-4690-3-3. PMC 1363733. PMID 16409629.{{cite journal}}: Обслуговування CS1: Сторінки із непозначеним DOI з безкоштовним доступом (посилання)
Humphreys DT, Westman BJ, Martin DI, Preiss T (2005). MicroRNAs control translation initiation by inhibiting eukaryotic initiation factor 4E/cap and poly(A) tail function. Proc Natl Acad Sci USA. 102 (47): 16961—16966. doi:10.1073/pnas.0506482102. PMC 1287990. PMID 16287976.
L. Aravind, Hidemi Watanabe, David J. Lipman, and Eugene V. Koonin (2000). Lineage-specific loss and divergence of functionally linked genes in eukaryotes. Proceedings of the National Academy of Sciences. 97 (21): 11319—11324. doi:10.1073/pnas.200346997. PMC 17198. PMID 11016957.
Morita T, Mochizuki Y, Aiba H (2006). Translational repression is sufficient for gene silencing by bacterial small noncoding RNAs in the absence of mRNA destruction. Proc Natl Acad Sci USA. 103 (13): 4858—63. doi:10.1073/pnas.0509638103. PMC 1458760. PMID 16549791.
Makarova K, Grishin N, Shabalina S, Wolf Y, Koonin E (2006). A putative RNA-interference-based immune system in prokaryotes: computational analysis of the predicted enzymatic machinery, functional analogies with eukaryotic RNAi, and hypothetical mechanisms of action. Biol Direct. 1: 7. doi:10.1186/1745-6150-1-7. PMC 1462988. PMID 16545108.{{cite journal}}: Обслуговування CS1: Сторінки із непозначеним DOI з безкоштовним доступом (посилання)
Blevins T, Rajeswaran R, Shivaprasad P, Beknazariants D, Si-Ammour A, Park H, Vazquez F, Robertson D, Meins F, Hohn T, Pooggin M (2006). Four plant Dicers mediate viral small RNA biogenesis and DNA virus induced silencing. Nucleic Acids Res. 34 (21): 6233—46. doi:10.1093/nar/gkl886. PMC 1669714. PMID 17090584.
Palauqui J, Elmayan T, Pollien J, Vaucheret H (1997). Systemic acquired silencing: transgene-specific post-transcriptional silencing is transmitted by grafting from silenced stocks to non-silenced scions. EMBO J. 16 (15): 4738—45. doi:10.1093/emboj/16.15.4738. PMC 1170100. PMID 9303318.
Lucy A, Guo H, Li W, Ding S (2000). Suppression of post-transcriptional gene silencing by a plant viral protein localized in the nucleus. EMBO J. 19 (7): 1672—80. doi:10.1093/emboj/19.7.1672. PMC 310235. PMID 10747034.
Mérai Z, Kerényi Z, Kertész S, Magna M, Lakatos L, Silhavy D (2006). Double-stranded RNA binding may be a general plant RNA viral strategy to suppress RNA silencing. J Virol. 80 (12): 5747—56. doi:10.1128/JVI.01963-05. PMC 1472586. PMID 16731914.
Katiyar-Agarwal S, Morgan R, Dahlbeck D, Borsani O, Villegas A, Zhu J, Staskawicz B, Jin H (2006). A pathogen-inducible endogenous siRNA in plant immunity. Proc Natl Acad Sci USA. 103 (47): 18002—7. doi:10.1073/pnas.0608258103. PMC 1693862. PMID 17071740.
Wang X, Aliyari R, Li W, Li H, Kim K, Carthew R, Atkinson P, Ding S (2006). RNA interference directs innate immunity against viruses in adult Drosophila. Science. 312 (5772): 452—4. doi:10.1126/science.1125694. PMC 1509097. PMID 16556799.
Lu R, Maduro M, Li F, Li H, Broitman-Maduro G, Li W, Ding S (2005). Animal virus replication and RNAi-mediated antiviral silencing in Caenorhabditis elegans. Nature. 436 (7053): 1040—3. doi:10.1038/nature03870. PMC 1388260. PMID 16107851.
Li H, Ding S (2005). Antiviral silencing in animals. FEBS Lett. 579 (26): 5965—73. doi:10.1016/j.febslet.2005.08.034. PMC 1350842. PMID 16154568.
Li LC, Okino ST, Zhao H та ін. (2006). Small dsRNAs induce transcriptional activation in human cells. Proc. Natl. Acad. Sci. U.S.A. 103 (46): 17337—42. doi:10.1073/pnas.0607015103. PMC 1859931. PMID 17085592. {{cite journal}}: Явне використання «та ін.» у: |author= (довідка)
Cerutti H, Casas-Mollano J (2006). On the origin and functions of RNA-mediated silencing: from protists to man. Curr Genet. 50 (2): 81—99. doi:10.1007/s00294-006-0078-x. PMC 2583075. PMID 16691418.
Qiu S, Adema C, Lane T (2005). A computational study of off-target effects of RNA interference. Nucleic Acids Res. 33 (6): 1834—47. doi:10.1093/nar/gki324. PMC 1072799. PMID 15800213.
Naito Y, Yamada T, Matsumiya T, Ui-Tei K, Saigo K, Morishita S (2005). dsCheck: highly sensitive off-target search software for double-stranded RNA-mediated RNA interference. Nucleic Acids Res. 33 (Web Server issue): W589—91. doi:10.1093/nar/gki419. PMC 1160180. PMID 15980542.
Henschel A, Buchholz F, Habermann B (2004). DEQOR: a web-based tool for the design and quality control of siRNAs. Nucleic Acids Res. 32 (Web Server issue): W113—20. doi:10.1093/nar/gkh408. PMC 441546. PMID 15215362.
Naito Y, Yamada T, Ui-Tei K, Morishita S, Saigo K (2004). siDirect: highly effective, target-specific siRNA design software for mammalian RNA interference. Nucleic Acids Res. 32 (Web Server issue): W124—9. doi:10.1093/nar/gkh442. PMC 441580. PMID 15215364.
Naito Y, Ui-Tei K, Nishikawa T, Takebe Y, Saigo K (2006). siVirus: web-based antiviral siRNA design software for highly divergent viral sequences. Nucleic Acids Res. 34 (Web Server issue): W448—50. doi:10.1093/nar/gkl214. PMC 1538817. PMID 16845046.
Reynolds A, Anderson E, Vermeulen A, Fedorov Y, Robinson K, Leake D, Karpilow J, Marshall W, Khvorova A (2006). Induction of the interferon response by siRNA is cell type- and duplex length-dependent. RNA. 12 (6): 988—93. doi:10.1261/rna.2340906. PMC 1464853. PMID 16611941.
Tiscornia G, Tergaonkar V, Galimi F, Verma I (2004). CRE recombinase-inducible RNA interference mediated by lentiviral vectors. Proc Natl Acad Sci USA. 101 (19): 7347—51. doi:10.1073/pnas.0402107101. PMC 409921. PMID 15123829.
Ventura A, Meissner A, Dillon C, McManus M, Sharp P, Van Parijs L, Jaenisch R, Jacks T (2004). Cre-lox-regulated conditional RNA interference from transgenes. Proc Natl Acad Sci USA. 101 (28): 10380—5. doi:10.1073/pnas.0403954101. PMC 478580. PMID 15240889.
Brock T, Browse J, Watts J (2006). Genetic regulation of unsaturated fatty acid composition in C. elegans. PLoS Genet. 2 (7): e108. doi:10.1371/journal.pgen.0020108. PMC 1500810. PMID 16839188. Архів оригіналу за 22 лютого 2008. Процитовано 28 квітня 2019.{{cite journal}}: Обслуговування CS1: Сторінки із непозначеним DOI з безкоштовним доступом (посилання)
Travella S, Klimm T, Keller B (2006). RNA interference-based gene silencing as an efficient tool for functional genomics in hexaploid bread wheat. Plant Physiol. 142 (1): 6—20. doi:10.1104/pp.106.084517. PMC 1557595. PMID 16861570.
Paddison P, Caudy A, Hannon G (2002). Stable suppression of gene expression by RNAi in mammalian cells. Proc Natl Acad Sci USA. 99 (3): 1443—8. doi:10.1073/pnas.032652399. PMC 122210. PMID 11818553.
Zender L, Hutker S, Liedtke C, Tillmann H, Zender S, Mundt B, Waltemathe M, Gosling T, Flemming P, Malek N, Trautwein C, Manns M, Kuhnel F, Kubicka S (2003). Caspase 8 small interfering RNA prevents acute liver failure in mice. Proc Natl Acad Sci USA. 100 (13): 7797—802. doi:10.1073/pnas.1330920100. PMC 164667. PMID 12810955.
Kusov Y, Kanda T, Palmenberg A, Sgro J, Gauss-Müller V (2006). Silencing of hepatitis A virus infection by small interfering RNAs. J Virol. 80 (11): 5599—610. doi:10.1128/JVI.01773-05. PMC 1472172. PMID 16699041.
Sunilkumar G, Campbell L, Puckhaber L, Stipanovic R, Rathore K (2006). Engineering cottonseed for use in human nutrition by tissue-specific reduction of toxic gossypol. Proc Natl Acad Sci USA. 103 (48): 18054—9. doi:10.1073/pnas.0605389103. PMC 1838705. PMID 17110445.

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Daneholt, Bertil. Advanced Information: RNA interference. The Nobel Prize in Physiology or Medicine 2006. Архів оригіналу за 25 серпня 2011. Процитовано 25 січня 2007.

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Brock T, Browse J, Watts J (2006). Genetic regulation of unsaturated fatty acid composition in C. elegans. PLoS Genet. 2 (7): e108. doi:10.1371/journal.pgen.0020108. PMC 1500810. PMID 16839188. Архів оригіналу за 22 лютого 2008. Процитовано 28 квітня 2019.{{cite journal}}: Обслуговування CS1: Сторінки із непозначеним DOI з безкоштовним доступом (посилання)

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Jones L, Ratcliff F, Baulcombe DC (2001). RNA-directed transcriptional gene silencing in plants can be inherited independently of the RNA trigger and requires Met1 for maintenance. Current Biology. 11 (10): 747—757. doi:10.1016/S0960-9822(01)00226-3. PMID 11378384.

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Brock T, Browse J, Watts J (2006). Genetic regulation of unsaturated fatty acid composition in C. elegans. PLoS Genet. 2 (7): e108. doi:10.1371/journal.pgen.0020108. PMC 1500810. PMID 16839188. Архів оригіналу за 22 лютого 2008. Процитовано 28 квітня 2019.{{cite journal}}: Обслуговування CS1: Сторінки із непозначеним DOI з безкоштовним доступом (посилання)

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Daneholt, Bertil. Advanced Information: RNA interference. The Nobel Prize in Physiology or Medicine 2006. Архів оригіналу за 25 серпня 2011. Процитовано 25 січня 2007.

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Ledford, Heidi (2018). Gene-silencing technology gets first drug approval after 20-year wait. Nature. doi:10.1038/d41586-018-05867-7. ISSN 0028-0836.(англ.)

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