Онтологія гена (Ukrainian Wikipedia)

Analysis of information sources in references of the Wikipedia article "Онтологія гена" in Ukrainian language version.

refsWebsite

Global rank Ukrainian rank

14nih.gov

4^th place

5^th place

10doi.org

2^nd place

4^th place

10geneontology.org

low place

4web.archive.org

1^st place

1archive.org

6^th place

1oup.com

485^th place

750^th place

1issn.org

57^th place

low place

1obofoundry.org

low place

1pantherdb.org

low place

1berkeleybop.org

low place

archive.org

Smith B, Ashburner M, Rosse C, Bard J, Bug W, Ceusters W, Goldberg LJ, Eilbeck K, Ireland A, Mungall CJ, Leontis N, Rocca-Serra P, Ruttenberg A, Sansone SA, Scheuermann RH, Shah N, Whetzel PL, Lewis S (November 2007). The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration. Nat. Biotechnol. 25 (11): 1251—5. doi:10.1038/nbt1346. PMC 2814061. PMID 17989687.

berkeleybop.org

amigo2.berkeleybop.org

Gene Ontology Consortium. AmiGO 2: Matrix (англ.). amigo2.berkeleybop.org. Процитовано 4 квітня 2018.{{cite web}}: Обслуговування CS1: Сторінки з параметром url-status, але без параметра archive-url (посилання)

doi.org

du Plessis L, Skunca N, Dessimoz C (November 2011). The what, where, how and why of gene ontology — a primer for bioinformaticians. Brief Bioinform. 12 (6): 723—35. doi:10.1093/bib/bbr002. PMC 3220872. PMID 21330331.
The Gene Ontology Consortium (January 2012). The Gene Ontology: enhancements for 2011. Nucleic Acids Res. 40 (Database issue): D559—64. doi:10.1093/nar/gkr1028. PMC 3245151. PMID 22102568.
The Gene Ontology Consortium (January 2017). Expansion of the Gene Ontology knowledgebase and resources. Nucleic Acids Res. 45 (D1): D331—D338. doi:10.1093/nar/gkw1108.
The Gene Ontology Consortium (January 2013). Gene Ontology annotations and resources. Nucleic Acids Res. 41 (Database issue): D530—5. doi:10.1093/nar/gks1050. PMC 3531070. PMID 23161678.
Smith B, Ashburner M, Rosse C, Bard J, Bug W, Ceusters W, Goldberg LJ, Eilbeck K, Ireland A, Mungall CJ, Leontis N, Rocca-Serra P, Ruttenberg A, Sansone SA, Scheuermann RH, Shah N, Whetzel PL, Lewis S (November 2007). The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration. Nat. Biotechnol. 25 (11): 1251—5. doi:10.1038/nbt1346. PMC 2814061. PMID 17989687.
Ashburner M, Ball CA, Blake JA, Botstein D, Butler H, Cherry JM, Davis AP, Dolinski K, Dwight SS, Eppig JT, Harris MA, Hill DP, Issel-Tarver L, Kasarskis A, Lewis S, Matese JC, Richardson JE, Ringwald M, Rubin GM, Sherlock G (May 2000). Gene ontology: tool for the unification of biology. The Gene Ontology Consortium. Nat. Genet. 25 (1): 25—9. doi:10.1038/75556. PMC 3037419. PMID 10802651.
Carbon S, Ireland A, Mungall CJ, Shu S, Marshall B, Lewis S; AmiGO Hub; Web Presence Working Group (January 2008). AmiGO: Online access to ontology and annotation data. Bioinformatics. 25 (2): 288—289. doi:10.1093/bioinformatics/btn615. PMC 2639003. PMID 19033274.
Huaiyu Mi, Xiaosong Huang, Anushya Muruganujan, Haiming Tang, Caitlin Mills, Diane Kang, and Paul D. Thomas (28 листопада 2016). PANTHER version 11: expanded annotation data from Gene Ontology and Reactome pathways, and data analysis tool enhancements. Nucleic Acids Research. 45 (Database): D183—D189. doi:10.1093/nar/gkw1138. PMC 5210595.{{cite journal}}: Обслуговування CS1: Сторінки з PMC з іншим форматом (посилання)
Day-Richter J, Harris MA, Haendel M, Gene Ontology OBO-Edit Working Group, Lewis S (August 2007). OBO-Edit – an ontology editor for biologists. Bioinformatics. 23 (16): 2198—2200. doi:10.1093/bioinformatics/btm112. PMID 17545183.

dx.doi.org

Richard N. Smith, Jelena Aleksic, Daniela Butano, Adrian Carr, Sergio Contrino. InterMine: a flexible data warehouse system for the integration and analysis of heterogeneous biological data : [англ.] // Bioinformatics. — 2012-12-01. — Vol. 28, no. 23. — С. 3163–3165. — ISSN 1367-4803. — DOI:10.1093/bioinformatics/bts577.

geneontology.org

wiki.geneontology.org

Руководство по работе с AmiGO.
The GO Consortium. Manual Visualization.
The GO Consortium. Manual GO Slimmer.
The GO Consortium. Manual GO BLAST.
The GO Consortium. Manual PAINT.

geneontology.org

The GO Consortium. Архів оригіналу за 2 липня 2014. Процитовано 11 листопада 2018.
The GO Consortium. База данных «Генной онтологии» в формате .obo. Архів оригіналу (OBO 1.2 flat file) за 6 жовтня 2015. Процитовано 11 листопада 2018.
The GO Consortium. Mappings of External Classification Systems to GO. Архів оригіналу за 25 червня 2014. Процитовано 11 листопада 2018.

amigo.geneontology.org

The GO Consortium. Search annotations.
The GO Consortium. Manual GOOSE.

issn.org

portal.issn.org

Richard N. Smith, Jelena Aleksic, Daniela Butano, Adrian Carr, Sergio Contrino. InterMine: a flexible data warehouse system for the integration and analysis of heterogeneous biological data : [англ.] // Bioinformatics. — 2012-12-01. — Vol. 28, no. 23. — С. 3163–3165. — ISSN 1367-4803. — DOI:10.1093/bioinformatics/bts577.

nih.gov

ncbi.nlm.nih.gov

du Plessis L, Skunca N, Dessimoz C (November 2011). The what, where, how and why of gene ontology — a primer for bioinformaticians. Brief Bioinform. 12 (6): 723—35. doi:10.1093/bib/bbr002. PMC 3220872. PMID 21330331.
The Gene Ontology Consortium (January 2012). The Gene Ontology: enhancements for 2011. Nucleic Acids Res. 40 (Database issue): D559—64. doi:10.1093/nar/gkr1028. PMC 3245151. PMID 22102568.
The Gene Ontology Consortium (January 2013). Gene Ontology annotations and resources. Nucleic Acids Res. 41 (Database issue): D530—5. doi:10.1093/nar/gks1050. PMC 3531070. PMID 23161678.
Smith B, Ashburner M, Rosse C, Bard J, Bug W, Ceusters W, Goldberg LJ, Eilbeck K, Ireland A, Mungall CJ, Leontis N, Rocca-Serra P, Ruttenberg A, Sansone SA, Scheuermann RH, Shah N, Whetzel PL, Lewis S (November 2007). The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration. Nat. Biotechnol. 25 (11): 1251—5. doi:10.1038/nbt1346. PMC 2814061. PMID 17989687.
Ashburner M, Ball CA, Blake JA, Botstein D, Butler H, Cherry JM, Davis AP, Dolinski K, Dwight SS, Eppig JT, Harris MA, Hill DP, Issel-Tarver L, Kasarskis A, Lewis S, Matese JC, Richardson JE, Ringwald M, Rubin GM, Sherlock G (May 2000). Gene ontology: tool for the unification of biology. The Gene Ontology Consortium. Nat. Genet. 25 (1): 25—9. doi:10.1038/75556. PMC 3037419. PMID 10802651.
Carbon S, Ireland A, Mungall CJ, Shu S, Marshall B, Lewis S; AmiGO Hub; Web Presence Working Group (January 2008). AmiGO: Online access to ontology and annotation data. Bioinformatics. 25 (2): 288—289. doi:10.1093/bioinformatics/btn615. PMC 2639003. PMID 19033274.
Huaiyu Mi, Xiaosong Huang, Anushya Muruganujan, Haiming Tang, Caitlin Mills, Diane Kang, and Paul D. Thomas (28 листопада 2016). PANTHER version 11: expanded annotation data from Gene Ontology and Reactome pathways, and data analysis tool enhancements. Nucleic Acids Research. 45 (Database): D183—D189. doi:10.1093/nar/gkw1138. PMC 5210595.{{cite journal}}: Обслуговування CS1: Сторінки з PMC з іншим форматом (посилання)

pubmed.ncbi.nlm.nih.gov

du Plessis L, Skunca N, Dessimoz C (November 2011). The what, where, how and why of gene ontology — a primer for bioinformaticians. Brief Bioinform. 12 (6): 723—35. doi:10.1093/bib/bbr002. PMC 3220872. PMID 21330331.
The Gene Ontology Consortium (January 2012). The Gene Ontology: enhancements for 2011. Nucleic Acids Res. 40 (Database issue): D559—64. doi:10.1093/nar/gkr1028. PMC 3245151. PMID 22102568.
The Gene Ontology Consortium (January 2013). Gene Ontology annotations and resources. Nucleic Acids Res. 41 (Database issue): D530—5. doi:10.1093/nar/gks1050. PMC 3531070. PMID 23161678.
Smith B, Ashburner M, Rosse C, Bard J, Bug W, Ceusters W, Goldberg LJ, Eilbeck K, Ireland A, Mungall CJ, Leontis N, Rocca-Serra P, Ruttenberg A, Sansone SA, Scheuermann RH, Shah N, Whetzel PL, Lewis S (November 2007). The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration. Nat. Biotechnol. 25 (11): 1251—5. doi:10.1038/nbt1346. PMC 2814061. PMID 17989687.
Ashburner M, Ball CA, Blake JA, Botstein D, Butler H, Cherry JM, Davis AP, Dolinski K, Dwight SS, Eppig JT, Harris MA, Hill DP, Issel-Tarver L, Kasarskis A, Lewis S, Matese JC, Richardson JE, Ringwald M, Rubin GM, Sherlock G (May 2000). Gene ontology: tool for the unification of biology. The Gene Ontology Consortium. Nat. Genet. 25 (1): 25—9. doi:10.1038/75556. PMC 3037419. PMID 10802651.
Carbon S, Ireland A, Mungall CJ, Shu S, Marshall B, Lewis S; AmiGO Hub; Web Presence Working Group (January 2008). AmiGO: Online access to ontology and annotation data. Bioinformatics. 25 (2): 288—289. doi:10.1093/bioinformatics/btn615. PMC 2639003. PMID 19033274.
Day-Richter J, Harris MA, Haendel M, Gene Ontology OBO-Edit Working Group, Lewis S (August 2007). OBO-Edit – an ontology editor for biologists. Bioinformatics. 23 (16): 2198—2200. doi:10.1093/bioinformatics/btm112. PMID 17545183.

obofoundry.org

The Open Biological and Biomedical Ontologies: Evidence Codes. Архів оригіналу за 26 листопада 2009.

oup.com

academic.oup.com

Richard N. Smith, Jelena Aleksic, Daniela Butano, Adrian Carr, Sergio Contrino. InterMine: a flexible data warehouse system for the integration and analysis of heterogeneous biological data : [англ.] // Bioinformatics. — 2012-12-01. — Vol. 28, no. 23. — С. 3163–3165. — ISSN 1367-4803. — DOI:10.1093/bioinformatics/bts577.

pantherdb.org

The GO Consortium. Manual PANTHER (PDF).

web.archive.org

The GO Consortium. Архів оригіналу за 2 липня 2014. Процитовано 11 листопада 2018.
The GO Consortium. База данных «Генной онтологии» в формате .obo. Архів оригіналу (OBO 1.2 flat file) за 6 жовтня 2015. Процитовано 11 листопада 2018.
The GO Consortium. Mappings of External Classification Systems to GO. Архів оригіналу за 25 червня 2014. Процитовано 11 листопада 2018.
The Open Biological and Biomedical Ontologies: Evidence Codes. Архів оригіналу за 26 листопада 2009.