真菌 (Chinese Wikipedia)

Analysis of information sources in references of the Wikipedia article "真菌" in Chinese language version.

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Whittaker, R. H. On the Broad Classification of Organisms. Quarterly Review of Biology. 1959, 34 (3): 210. JSTOR 2816520. doi:10.1086/402733.
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Le Calvez T, Burgaud G, Mahé S, Barbier G, Vandenkoornhuyse P. Fungal diversity in deep-sea hydrothermal ecosystems. Applied and Environmental Microbiology. October 2009, 75 (20): 6415–21. PMC 2765129 . PMID 19633124. doi:10.1128/AEM.00653-09.
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Steenkamp ET, Wright J, Baldauf SL. The protistan origins of animals and fungi. Molecular Biology and Evolution. January 2006, 23 (1): 93–106. PMID 16151185. doi:10.1093/molbev/msj011.
Stevens DA, Ichinomiya M, Koshi Y, Horiuchi H. Escape of Candida from caspofungin inhibition at concentrations above the MIC (paradoxical effect) accomplished by increased cell wall chitin; evidence for beta-1,6-glucan synthesis inhibition by caspofungin. Antimicrobial Agents and Chemotherapy. September 2006, 50 (9): 3160–1. PMC 1563524 . PMID 16940118. doi:10.1128/AAC.00563-06.
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Nikoh N, Fukatsu T. Interkingdom host jumping underground: phylogenetic analysis of entomoparasitic fungi of the genus cordyceps. Molecular Biology and Evolution. April 2000, 17 (4): 629–38. PMID 10742053. doi:10.1093/oxfordjournals.molbev.a026341.
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Talbot NJ. On the trail of a cereal killer: Exploring the biology of Magnaporthe grisea. Annual Review of Microbiology. 2003, 57: 177–202. PMID 14527276. doi:10.1146/annurev.micro.57.030502.090957.
Le Floch G, Rey P, Benizri E, Benhamou N, Tirilly Y. Impact of auxin-compounds produced by the antagonistic fungus Pythium oligandrum or the minor pathogen Pythium group F on plant growth.. Plant Soil. 2003, 257 (2): 459–470. doi:10.1023/a:1027330024834.
Kazmierczak P, McCabe P, Turina M, Wilk DJ, Van Alfen NK. The Mycovirus CHV1 Disrupts Secretion of a Developmentally Regulated Protein in Cryphonectria parasitica. Journal of Virology. June 2012, 86 (11): 6067–6074. PMC 3372201 . doi:10.1128/jvi.05756-11.
Anagnostakis, S. L.; Chen, B.; Geletka, L. M.; Nuss, D. L. Hypovirus Transmission to Ascospore Progeny by Field-Released Transgenic Hypovirulent Strains of Cryphonectria parasitica. Phytopathology. 1998, 88 (7): 598–604. PMID 18944931. doi:10.1094/PHYTO.1998.88.7.598.
Kojic M, Zhou Q, Lisby M, Holloman WK. Rec2 interplay with both Brh2 and Rad51 balances recombinational repair in Ustilago maydis. Molecular and Cellular Biology. January 2006, 26 (2): 678–88. PMC 1346908 . PMID 16382157. doi:10.1128/MCB.26.2.678-688.2006.
el-Mekkawy S, Meselhy MR, Nakamura N, Tezuka Y, Hattori M, Kakiuchi N, Shimotohno K, Kawahata T, Otake T. Anti-HIV-1 and anti-HIV-1-protease substances from Ganoderma lucidum. Phytochemistry. November 1998, 49 (6): 1651–7. PMID 9862140. doi:10.1016/S0031-9422(98)00254-4.
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Paterson RR. Ganoderma - a therapeutic fungal biofactory. Phytochemistry. September 2006, 67 (18): 1985–2001. PMID 16905165. doi:10.1016/j.phytochem.2006.07.004.
Winkler D. Yartsa Gunbu (Cordyceps sinensis) and the fungal commodification of the rural economy in Tibet AR. Economic Botany. 2008, 62 (3): 291–305. doi:10.1007/s12231-008-9038-3.
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archives-ouvertes.fr

hal.archives-ouvertes.fr

Silar P. Protistes Eucaryotes: Origine, Evolution et Biologie des Microbes Eucaryotes. HAL: 462. 2016 [2017-06-29]. ISBN 978-2-9555841-0-1. （原始内容存档于2017-09-25）.

arizona.edu

hummingbirds.arizona.edu

Michod RE, Bernstein H, Nedelcu AM. Adaptive value of sex in microbial pathogens (PDF). Infection, Genetics and Evolution. May 2008, 8 (3): 267–85 [2017-06-29]. PMID 18295550. doi:10.1016/j.meegid.2008.01.002. （原始内容存档 (PDF)于2016-12-30）.

arxiv.org

Willensdorfer M. On the evolution of differentiated multicellularity. Evolution; International Journal of Organic Evolution. February 2009, 63 (2): 306–23. PMID 19154376. arXiv:0801.2610 . doi:10.1111/j.1558-5646.2008.00541.x.

asm.org

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Guarro J, Stchigel AM. Developments in fungal taxonomy. Clinical Microbiology Reviews. July 1999, 12 (3): 454–500 [2017-06-29]. PMC 100249 . PMID 10398676. （原始内容存档于2017-11-23）.

bbc.co.uk

news.bbc.co.uk

Fungi to fight 'toxic war zones'. BBC News. 2008-05-05 [2017-06-18]. （原始内容存档于2017-09-15）.

biomedcentral.com

bmcevolbiol.biomedcentral.com

Liu, Yu; Steenkamp, Emma T; Brinkmann, Henner; Forget, Lise; Philippe, Hervé; Lang, B Franz. Phylogenomic analyses predict sistergroup relationship of nucleariids and Fungi and paraphyly of zygomycetes with significant support. BMC Evolutionary Biology. 2009, 9 (1): 272 [2018-08-01]. ISSN 1471-2148. PMC 2789072 . PMID 19939264. doi:10.1186/1471-2148-9-272. （原始内容存档于2018-06-13）.

books.google.com

裘維蕃. 菌物世界漫游. 清華大學出版社暨南大學出版社. : 2 [2021-02-06]. （原始内容存档于2019-06-04）.

clarku.edu

Hibbett DS, Binder M, Bischoff JF, Blackwell M, Cannon PF, Eriksson OE, et al. A higher-level phylogenetic classification of the Fungi (PDF). Mycological Research. May 2007, 111 (Pt 5): 509–47 [2012-02-19]. PMID 17572334. doi:10.1016/j.mycres.2007.03.004. （原始内容 (PDF)存档于2009-03-26）.

cornell.edu

biocontrol.entomology.cornell.edu

Trichoderma spp., including T. harzianum, T. viride, T. koningii, T. hamatum and other spp. Deuteromycetes, Moniliales (asexual classification system). Biological Control: A Guide to Natural Enemies in North America. [2007-07-10]. （原始内容存档于2011-04-14）.

cybertruffle.org.uk

Harris SD. Branching of fungal hyphae: regulation, mechanisms and comparison with other branching systems. Mycologia. 2008, 100 (6): 823–32 [2016-05-01]. PMID 19202837. doi:10.3852/08-177. （原始内容存档于2016-04-12）.
Redecker D, Raab P. Phylogeny of the glomeromycota (arbuscular mycorrhizal fungi): recent developments and new gene markers. Mycologia. 2006, 98 (6): 885–95 [2012-02-19]. PMID 17486965. doi:10.3852/mycologia.98.6.885. （原始内容存档于2015-09-23）.
Pringle A, Patek SN, Fischer M, Stolze J, Money NP. The captured launch of a ballistospore. Mycologia. 2005, 97 (4): 866–71 [2017-06-29]. PMID 16457355. doi:10.3852/mycologia.97.4.866. （原始内容存档于2016-04-12）.
Taylor JW, Berbee ML. Dating divergences in the Fungal Tree of Life: review and new analyses. Mycologia. 2006, 98 (6): 838–49 [2017-06-29]. PMID 17486961. doi:10.3852/mycologia.98.6.838. （原始内容存档于2016-04-12）.
Taylor TN, Hass H, Kerp H, Krings M, Hanlin RT. Perithecial ascomycetes from the 400 million year old Rhynie chert: an example of ancestral polymorphism. Mycologia. 2005, 97 (1): 269–85 [2017-06-29]. PMID 16389979. doi:10.3852/mycologia.97.1.269. （原始内容存档于2016-04-12）.
Dennis RL. A Middle Pennsylvanian basidiomycete mycelium with clamp connections. Mycologia. 1970, 62 (3): 578–584 [2017-06-29]. JSTOR 3757529. doi:10.2307/3757529. （原始内容存档于2018-09-29）.
James TY, Letcher PM, Longcore JE, Mozley-Standridge SE, Porter D, Powell MJ, Griffith GW, Vilgalys R. A molecular phylogeny of the flagellated fungi (Chytridiomycota) and description of a new phylum (Blastocladiomycota). Mycologia. 2006, 98 (6): 860–71 [2012-02-19]. PMID 17486963. doi:10.3852/mycologia.98.6.860. （原始内容存档于2015-09-23）.
Nguyen NH, Suh SO, Blackwell M. Five novel Candida species in insect-associated yeast clades isolated from Neuroptera and other insects. Mycologia. 2007, 99 (6): 842–58 [2017-06-29]. PMID 18333508. doi:10.3852/mycologia.99.6.842. （原始内容存档于2017-05-07）.

doi.org

dx.doi.org

Tedersoo, Leho; Sanchez-Ramırez, Santiago; Koljalg, Urmas; Bahram, Mohammad; Doring, Markus; Schigel, Dmitry; May, Tom; Ryberg, Martin; Abarenkov, Kessy. High-level classification of the Fungi and a tool for evolutionary ecological analyses. Fungal Diversity. 2018-02-22, 90 (1): 135–159 [2018-07-17]. doi:10.1007/s13225-018-0401-0. （原始内容存档于2018-07-07）.
Whittaker, R. H. On the Broad Classification of Organisms. Quarterly Review of Biology. 1959, 34 (3): 210. JSTOR 2816520. doi:10.1086/402733.
Liu, Yu; Steenkamp, Emma T; Brinkmann, Henner; Forget, Lise; Philippe, Hervé; Lang, B Franz. Phylogenomic analyses predict sistergroup relationship of nucleariids and Fungi and paraphyly of zygomycetes with significant support. BMC Evolutionary Biology. 2009, 9 (1): 272 [2018-08-01]. ISSN 1471-2148. PMC 2789072 . PMID 19939264. doi:10.1186/1471-2148-9-272. （原始内容存档于2018-06-13）.
Bruns T. Evolutionary biology: a kingdom revised. Nature. October 2006, 443 (7113): 758–61. Bibcode:2006Natur.443..758B. PMID 17051197. doi:10.1038/443758a.
Baldauf SL, Palmer JD. Animals and fungi are each other's closest relatives: congruent evidence from multiple proteins. Proceedings of the National Academy of Sciences of the United States of America. December 1993, 90 (24): 11558–62. Bibcode:1993PNAS...9011558B. PMC 48023 . PMID 8265589. doi:10.1073/pnas.90.24.11558.
Keller NP, Turner G, Bennett JW. Fungal secondary metabolism - from biochemistry to genomics. Nature Reviews. Microbiology. December 2005, 3 (12): 937–47. PMID 16322742. doi:10.1038/nrmicro1286.
Shoji JY, Arioka M, Kitamoto K. Possible involvement of pleiomorphic vacuolar networks in nutrient recycling in filamentous fungi. Autophagy. 2006, 2 (3): 226–7. PMID 16874107. doi:10.4161/auto.2695.
Tudzynski B. Gibberellin biosynthesis in fungi: genes, enzymes, evolution, and impact on biotechnology. Applied Microbiology and Biotechnology. March 2005, 66 (6): 597–611. PMID 15578178. doi:10.1007/s00253-004-1805-1.
Mihail JD, Bruhn JN. Foraging behaviour of Armillaria rhizomorph systems. Mycological Research. November 2005, 109 (Pt 11): 1195–207. PMID 16279413. doi:10.1017/S0953756205003606.
Zabriskie TM, Jackson MD. Lysine biosynthesis and metabolism in fungi. Natural Product Reports. February 2000, 17 (1): 85–97. PMID 10714900. doi:10.1039/a801345d.
Xu H, Andi B, Qian J, West AH, Cook PF. The alpha-aminoadipate pathway for lysine biosynthesis in fungi. Cell Biochemistry and Biophysics（英语：Cell Biochemistry and Biophysics）. 2006, 46 (1): 43–64. PMID 16943623. doi:10.1385/CBB:46:1:43.
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Dadachova E, Bryan RA, Huang X, Moadel T, Schweitzer AD, Aisen P, Nosanchuk JD, Casadevall A. Ionizing radiation changes the electronic properties of melanin and enhances the growth of melanized fungi. PLoS One. 2007, 2 (5): e457. Bibcode:2007PLoSO...2..457D. PMC 1866175 . PMID 17520016. doi:10.1371/journal.pone.0000457.
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Le Calvez T, Burgaud G, Mahé S, Barbier G, Vandenkoornhuyse P. Fungal diversity in deep-sea hydrothermal ecosystems. Applied and Environmental Microbiology. October 2009, 75 (20): 6415–21. PMC 2765129 . PMID 19633124. doi:10.1128/AEM.00653-09.
Mueller GM, Schmit JP. Fungal biodiversity: what do we know? What can we predict?. Biodiversity and Conservation. 2006, 16: 1–5. doi:10.1007/s10531-006-9117-7.
Hawksworth DL, Lücking R. Fungal Diversity Revisited: 2.2 to 3.8 Million Species. Microbiology Spectrum. July 2017, 5 (4): 79. ISBN 9781555819576. PMID 28752818. doi:10.1128/microbiolspec.FUNK-0052-2016.
Hibbett DS, Binder M, Bischoff JF, Blackwell M, Cannon PF, Eriksson OE, et al. A higher-level phylogenetic classification of the Fungi (PDF). Mycological Research. May 2007, 111 (Pt 5): 509–47 [2012-02-19]. PMID 17572334. doi:10.1016/j.mycres.2007.03.004. （原始内容 (PDF)存档于2009-03-26）.
Peintner U, Pöder R, Pümpel T. The Iceman's fungi. Mycological Research. 1998, 102 (10): 1153–1162. doi:10.1017/S0953756298006546.
Hawksworth DL. Pandora's mycological box: molecular sequences vs. morphology in understanding fungal relationships and biodiversity. Revista Iberoamericana de MicologíA. September 2006, 23 (3): 127–33. PMID 17196017. doi:10.1016/S1130-1406(06)70031-6.
Harris SD. Branching of fungal hyphae: regulation, mechanisms and comparison with other branching systems. Mycologia. 2008, 100 (6): 823–32 [2016-05-01]. PMID 19202837. doi:10.3852/08-177. （原始内容存档于2016-04-12）.
Parniske M. Arbuscular mycorrhiza: the mother of plant root endosymbioses. Nature Reviews. Microbiology. October 2008, 6 (10): 763–75. PMID 18794914. doi:10.1038/nrmicro1987.
Steenkamp ET, Wright J, Baldauf SL. The protistan origins of animals and fungi. Molecular Biology and Evolution. January 2006, 23 (1): 93–106. PMID 16151185. doi:10.1093/molbev/msj011.
Stevens DA, Ichinomiya M, Koshi Y, Horiuchi H. Escape of Candida from caspofungin inhibition at concentrations above the MIC (paradoxical effect) accomplished by increased cell wall chitin; evidence for beta-1,6-glucan synthesis inhibition by caspofungin. Antimicrobial Agents and Chemotherapy. September 2006, 50 (9): 3160–1. PMC 1563524 . PMID 16940118. doi:10.1128/AAC.00563-06.
Ferguson BA, Dreisbach TA, Parks CG, Filip GM, Schmitt CL. Coarse-scale population structure of pathogenic Armillaria species in a mixed-conifer forest in the Blue Mountains of northeast Oregon. Canadian Journal of Forest Research（英语：Canadian Journal of Forest Research）. 2003, 33 (4): 612–623. doi:10.1139/x03-065.
Peñalva MA, Arst HN. Regulation of gene expression by ambient pH in filamentous fungi and yeasts. Microbiology and Molecular Biology Reviews. September 2002, 66 (3): 426–46, table of contents. PMC 120796 . PMID 12208998. doi:10.1128/MMBR.66.3.426-446.2002.
Howard RJ, Ferrari MA, Roach DH, Money NP. Penetration of hard substrates by a fungus employing enormous turgor pressures. Proceedings of the National Academy of Sciences of the United States of America. December 1991, 88 (24): 11281–4. Bibcode:1991PNAS...8811281H. PMC 53118 . PMID 1837147. doi:10.1073/pnas.88.24.11281.
Wang ZY, Jenkinson JM, Holcombe LJ, Soanes DM, Veneault-Fourrey C, Bhambra GK, Talbot NJ. The molecular biology of appressorium turgor generation by the rice blast fungus Magnaporthe grisea. Biochemical Society Transactions. April 2005, 33 (Pt 2): 384–8. PMID 15787612. doi:10.1042/BST0330384.
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核形蟲與泉生蟲（英语：Fonticula）都沒有幾丁質組成的細胞壁，具有圓盤狀的粒線體皺褶，以變形蟲的型態生長，以吞噬作用取得養分，基因組中缺少第二型（Division II）幾丁質合成酶（英语：chitin synthetase）的基因，這些特徵都與真菌不同。隱真菌門雖然也有許多物種缺乏細胞壁，但它們仍有第二型幾丁質合成酶的基因，細胞壁的缺乏可能是該演化支分支以後才丟失的特徵^[2]
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