真菌 (Chinese Wikipedia)

Analysis of information sources in references of the Wikipedia article "真菌" in Chinese language version.

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Whittaker, R. H. On the Broad Classification of Organisms. Quarterly Review of Biology. 1959, 34 (3): 210. JSTOR 2816520. doi:10.1086/402733.
Mihail JD, Bruhn JN. Foraging behaviour of Armillaria rhizomorph systems. Mycological Research. November 2005, 109 (Pt 11): 1195–207. PMID 16279413. doi:10.1017/S0953756205003606.
Le Calvez T, Burgaud G, Mahé S, Barbier G, Vandenkoornhuyse P. Fungal diversity in deep-sea hydrothermal ecosystems. Applied and Environmental Microbiology. October 2009, 75 (20): 6415–21. PMC 2765129 . PMID 19633124. doi:10.1128/AEM.00653-09.
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Peintner U, Pöder R, Pümpel T. The Iceman's fungi. Mycological Research. 1998, 102 (10): 1153–1162. doi:10.1017/S0953756298006546.
Steenkamp ET, Wright J, Baldauf SL. The protistan origins of animals and fungi. Molecular Biology and Evolution. January 2006, 23 (1): 93–106. PMID 16151185. doi:10.1093/molbev/msj011.
Stevens DA, Ichinomiya M, Koshi Y, Horiuchi H. Escape of Candida from caspofungin inhibition at concentrations above the MIC (paradoxical effect) accomplished by increased cell wall chitin; evidence for beta-1,6-glucan synthesis inhibition by caspofungin. Antimicrobial Agents and Chemotherapy. September 2006, 50 (9): 3160–1. PMC 1563524 . PMID 16940118. doi:10.1128/AAC.00563-06.
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Barea JM, Pozo MJ, Azcón R, Azcón-Aguilar C. Microbial co-operation in the rhizosphere. Journal of Experimental Botany. July 2005, 56 (417): 1761–78. PMID 15911555. doi:10.1093/jxb/eri197.
Nikoh N, Fukatsu T. Interkingdom host jumping underground: phylogenetic analysis of entomoparasitic fungi of the genus cordyceps. Molecular Biology and Evolution. April 2000, 17 (4): 629–38. PMID 10742053. doi:10.1093/oxfordjournals.molbev.a026341.
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Brodo IM, Sharnoff SD. Lichens of North America. New Haven, Connecticut: Yale University Press. 2001. ISBN 0-300-08249-5.
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Talbot NJ. On the trail of a cereal killer: Exploring the biology of Magnaporthe grisea. Annual Review of Microbiology. 2003, 57: 177–202. PMID 14527276. doi:10.1146/annurev.micro.57.030502.090957.
Le Floch G, Rey P, Benizri E, Benhamou N, Tirilly Y. Impact of auxin-compounds produced by the antagonistic fungus Pythium oligandrum or the minor pathogen Pythium group F on plant growth.. Plant Soil. 2003, 257 (2): 459–470. doi:10.1023/a:1027330024834.
Kazmierczak P, McCabe P, Turina M, Wilk DJ, Van Alfen NK. The Mycovirus CHV1 Disrupts Secretion of a Developmentally Regulated Protein in Cryphonectria parasitica. Journal of Virology. June 2012, 86 (11): 6067–6074. PMC 3372201 . doi:10.1128/jvi.05756-11.
Anagnostakis, S. L.; Chen, B.; Geletka, L. M.; Nuss, D. L. Hypovirus Transmission to Ascospore Progeny by Field-Released Transgenic Hypovirulent Strains of Cryphonectria parasitica. Phytopathology. 1998, 88 (7): 598–604. PMID 18944931. doi:10.1094/PHYTO.1998.88.7.598.
Kojic M, Zhou Q, Lisby M, Holloman WK. Rec2 interplay with both Brh2 and Rad51 balances recombinational repair in Ustilago maydis. Molecular and Cellular Biology. January 2006, 26 (2): 678–88. PMC 1346908 . PMID 16382157. doi:10.1128/MCB.26.2.678-688.2006.
el-Mekkawy S, Meselhy MR, Nakamura N, Tezuka Y, Hattori M, Kakiuchi N, Shimotohno K, Kawahata T, Otake T. Anti-HIV-1 and anti-HIV-1-protease substances from Ganoderma lucidum. Phytochemistry. November 1998, 49 (6): 1651–7. PMID 9862140. doi:10.1016/S0031-9422(98)00254-4.
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Paterson RR. Ganoderma - a therapeutic fungal biofactory. Phytochemistry. September 2006, 67 (18): 1985–2001. PMID 16905165. doi:10.1016/j.phytochem.2006.07.004.
Winkler D. Yartsa Gunbu (Cordyceps sinensis) and the fungal commodification of the rural economy in Tibet AR. Economic Botany. 2008, 62 (3): 291–305. doi:10.1007/s12231-008-9038-3.
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archives-ouvertes.fr

hal.archives-ouvertes.fr

Silar P. Protistes Eucaryotes: Origine, Evolution et Biologie des Microbes Eucaryotes. HAL: 462. 2016 [2017-06-29]. ISBN 978-2-9555841-0-1. （原始内容存档于2017-09-25）.

arizona.edu

hummingbirds.arizona.edu

Michod RE, Bernstein H, Nedelcu AM. Adaptive value of sex in microbial pathogens (PDF). Infection, Genetics and Evolution. May 2008, 8 (3): 267–85 [2017-06-29]. PMID 18295550. doi:10.1016/j.meegid.2008.01.002. （原始内容存档 (PDF)于2016-12-30）.

arxiv.org

Willensdorfer M. On the evolution of differentiated multicellularity. Evolution; International Journal of Organic Evolution. February 2009, 63 (2): 306–23. PMID 19154376. arXiv:0801.2610 . doi:10.1111/j.1558-5646.2008.00541.x.

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cmr.asm.org

Guarro J, Stchigel AM. Developments in fungal taxonomy. Clinical Microbiology Reviews. July 1999, 12 (3): 454–500 [2017-06-29]. PMC 100249 . PMID 10398676. （原始内容存档于2017-11-23）.

bbc.co.uk

news.bbc.co.uk

Fungi to fight 'toxic war zones'. BBC News. 2008-05-05 [2017-06-18]. （原始内容存档于2017-09-15）.

biomedcentral.com

bmcevolbiol.biomedcentral.com

Liu, Yu; Steenkamp, Emma T; Brinkmann, Henner; Forget, Lise; Philippe, Hervé; Lang, B Franz. Phylogenomic analyses predict sistergroup relationship of nucleariids and Fungi and paraphyly of zygomycetes with significant support. BMC Evolutionary Biology. 2009, 9 (1): 272 [2018-08-01]. ISSN 1471-2148. PMC 2789072 . PMID 19939264. doi:10.1186/1471-2148-9-272. （原始内容存档于2018-06-13）.

books.google.com

裘維蕃. 菌物世界漫游. 清華大學出版社暨南大學出版社. : 2 [2021-02-06]. （原始内容存档于2019-06-04）.

clarku.edu

Hibbett DS, Binder M, Bischoff JF, Blackwell M, Cannon PF, Eriksson OE, et al. A higher-level phylogenetic classification of the Fungi (PDF). Mycological Research. May 2007, 111 (Pt 5): 509–47 [2012-02-19]. PMID 17572334. doi:10.1016/j.mycres.2007.03.004. （原始内容 (PDF)存档于2009-03-26）.

cornell.edu

biocontrol.entomology.cornell.edu

Trichoderma spp., including T. harzianum, T. viride, T. koningii, T. hamatum and other spp. Deuteromycetes, Moniliales (asexual classification system). Biological Control: A Guide to Natural Enemies in North America. [2007-07-10]. （原始内容存档于2011-04-14）.

cybertruffle.org.uk

Harris SD. Branching of fungal hyphae: regulation, mechanisms and comparison with other branching systems. Mycologia. 2008, 100 (6): 823–32 [2016-05-01]. PMID 19202837. doi:10.3852/08-177. （原始内容存档于2016-04-12）.
Redecker D, Raab P. Phylogeny of the glomeromycota (arbuscular mycorrhizal fungi): recent developments and new gene markers. Mycologia. 2006, 98 (6): 885–95 [2012-02-19]. PMID 17486965. doi:10.3852/mycologia.98.6.885. （原始内容存档于2015-09-23）.
Pringle A, Patek SN, Fischer M, Stolze J, Money NP. The captured launch of a ballistospore. Mycologia. 2005, 97 (4): 866–71 [2017-06-29]. PMID 16457355. doi:10.3852/mycologia.97.4.866. （原始内容存档于2016-04-12）.
Taylor JW, Berbee ML. Dating divergences in the Fungal Tree of Life: review and new analyses. Mycologia. 2006, 98 (6): 838–49 [2017-06-29]. PMID 17486961. doi:10.3852/mycologia.98.6.838. （原始内容存档于2016-04-12）.
Taylor TN, Hass H, Kerp H, Krings M, Hanlin RT. Perithecial ascomycetes from the 400 million year old Rhynie chert: an example of ancestral polymorphism. Mycologia. 2005, 97 (1): 269–85 [2017-06-29]. PMID 16389979. doi:10.3852/mycologia.97.1.269. （原始内容存档于2016-04-12）.
Dennis RL. A Middle Pennsylvanian basidiomycete mycelium with clamp connections. Mycologia. 1970, 62 (3): 578–584 [2017-06-29]. JSTOR 3757529. doi:10.2307/3757529. （原始内容存档于2018-09-29）.
James TY, Letcher PM, Longcore JE, Mozley-Standridge SE, Porter D, Powell MJ, Griffith GW, Vilgalys R. A molecular phylogeny of the flagellated fungi (Chytridiomycota) and description of a new phylum (Blastocladiomycota). Mycologia. 2006, 98 (6): 860–71 [2012-02-19]. PMID 17486963. doi:10.3852/mycologia.98.6.860. （原始内容存档于2015-09-23）.
Nguyen NH, Suh SO, Blackwell M. Five novel Candida species in insect-associated yeast clades isolated from Neuroptera and other insects. Mycologia. 2007, 99 (6): 842–58 [2017-06-29]. PMID 18333508. doi:10.3852/mycologia.99.6.842. （原始内容存档于2017-05-07）.

doi.org

Tedersoo, Leho; Sanchez-Ramırez, Santiago; Koljalg, Urmas; Bahram, Mohammad; Doring, Markus; Schigel, Dmitry; May, Tom; Ryberg, Martin; Abarenkov, Kessy. High-level classification of the Fungi and a tool for evolutionary ecological analyses. Fungal Diversity. 2018-02-22, 90 (1): 135–159 [2018-07-17]. doi:10.1007/s13225-018-0401-0. （原始内容存档于2018-07-07）.
Whittaker, R. H. On the Broad Classification of Organisms. Quarterly Review of Biology. 1959, 34 (3): 210. JSTOR 2816520. doi:10.1086/402733.
Liu, Yu; Steenkamp, Emma T; Brinkmann, Henner; Forget, Lise; Philippe, Hervé; Lang, B Franz. Phylogenomic analyses predict sistergroup relationship of nucleariids and Fungi and paraphyly of zygomycetes with significant support. BMC Evolutionary Biology. 2009, 9 (1): 272 [2018-08-01]. ISSN 1471-2148. PMC 2789072 . PMID 19939264. doi:10.1186/1471-2148-9-272. （原始内容存档于2018-06-13）.
Bruns T. Evolutionary biology: a kingdom revised. Nature. October 2006, 443 (7113): 758–61. Bibcode:2006Natur.443..758B. PMID 17051197. doi:10.1038/443758a.
Baldauf SL, Palmer JD. Animals and fungi are each other's closest relatives: congruent evidence from multiple proteins. Proceedings of the National Academy of Sciences of the United States of America. December 1993, 90 (24): 11558–62. Bibcode:1993PNAS...9011558B. PMC 48023 . PMID 8265589. doi:10.1073/pnas.90.24.11558.
Keller NP, Turner G, Bennett JW. Fungal secondary metabolism - from biochemistry to genomics. Nature Reviews. Microbiology. December 2005, 3 (12): 937–47. PMID 16322742. doi:10.1038/nrmicro1286.
Shoji JY, Arioka M, Kitamoto K. Possible involvement of pleiomorphic vacuolar networks in nutrient recycling in filamentous fungi. Autophagy. 2006, 2 (3): 226–7. PMID 16874107. doi:10.4161/auto.2695.
Tudzynski B. Gibberellin biosynthesis in fungi: genes, enzymes, evolution, and impact on biotechnology. Applied Microbiology and Biotechnology. March 2005, 66 (6): 597–611. PMID 15578178. doi:10.1007/s00253-004-1805-1.
Mihail JD, Bruhn JN. Foraging behaviour of Armillaria rhizomorph systems. Mycological Research. November 2005, 109 (Pt 11): 1195–207. PMID 16279413. doi:10.1017/S0953756205003606.
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Xu H, Andi B, Qian J, West AH, Cook PF. The alpha-aminoadipate pathway for lysine biosynthesis in fungi. Cell Biochemistry and Biophysics（英语：Cell Biochemistry and Biophysics）. 2006, 46 (1): 43–64. PMID 16943623. doi:10.1385/CBB:46:1:43.
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Le Calvez T, Burgaud G, Mahé S, Barbier G, Vandenkoornhuyse P. Fungal diversity in deep-sea hydrothermal ecosystems. Applied and Environmental Microbiology. October 2009, 75 (20): 6415–21. PMC 2765129 . PMID 19633124. doi:10.1128/AEM.00653-09.
Mueller GM, Schmit JP. Fungal biodiversity: what do we know? What can we predict?. Biodiversity and Conservation. 2006, 16: 1–5. doi:10.1007/s10531-006-9117-7.
Hawksworth DL, Lücking R. Fungal Diversity Revisited: 2.2 to 3.8 Million Species. Microbiology Spectrum. July 2017, 5 (4): 79. ISBN 9781555819576. PMID 28752818. doi:10.1128/microbiolspec.FUNK-0052-2016.
Hibbett DS, Binder M, Bischoff JF, Blackwell M, Cannon PF, Eriksson OE, et al. A higher-level phylogenetic classification of the Fungi (PDF). Mycological Research. May 2007, 111 (Pt 5): 509–47 [2012-02-19]. PMID 17572334. doi:10.1016/j.mycres.2007.03.004. （原始内容 (PDF)存档于2009-03-26）.
Peintner U, Pöder R, Pümpel T. The Iceman's fungi. Mycological Research. 1998, 102 (10): 1153–1162. doi:10.1017/S0953756298006546.
Hawksworth DL. Pandora's mycological box: molecular sequences vs. morphology in understanding fungal relationships and biodiversity. Revista Iberoamericana de MicologíA. September 2006, 23 (3): 127–33. PMID 17196017. doi:10.1016/S1130-1406(06)70031-6.
Harris SD. Branching of fungal hyphae: regulation, mechanisms and comparison with other branching systems. Mycologia. 2008, 100 (6): 823–32 [2016-05-01]. PMID 19202837. doi:10.3852/08-177. （原始内容存档于2016-04-12）.
Parniske M. Arbuscular mycorrhiza: the mother of plant root endosymbioses. Nature Reviews. Microbiology. October 2008, 6 (10): 763–75. PMID 18794914. doi:10.1038/nrmicro1987.
Steenkamp ET, Wright J, Baldauf SL. The protistan origins of animals and fungi. Molecular Biology and Evolution. January 2006, 23 (1): 93–106. PMID 16151185. doi:10.1093/molbev/msj011.
Stevens DA, Ichinomiya M, Koshi Y, Horiuchi H. Escape of Candida from caspofungin inhibition at concentrations above the MIC (paradoxical effect) accomplished by increased cell wall chitin; evidence for beta-1,6-glucan synthesis inhibition by caspofungin. Antimicrobial Agents and Chemotherapy. September 2006, 50 (9): 3160–1. PMC 1563524 . PMID 16940118. doi:10.1128/AAC.00563-06.
Ferguson BA, Dreisbach TA, Parks CG, Filip GM, Schmitt CL. Coarse-scale population structure of pathogenic Armillaria species in a mixed-conifer forest in the Blue Mountains of northeast Oregon. Canadian Journal of Forest Research（英语：Canadian Journal of Forest Research）. 2003, 33 (4): 612–623. doi:10.1139/x03-065.
Peñalva MA, Arst HN. Regulation of gene expression by ambient pH in filamentous fungi and yeasts. Microbiology and Molecular Biology Reviews. September 2002, 66 (3): 426–46, table of contents. PMC 120796 . PMID 12208998. doi:10.1128/MMBR.66.3.426-446.2002.
Howard RJ, Ferrari MA, Roach DH, Money NP. Penetration of hard substrates by a fungus employing enormous turgor pressures. Proceedings of the National Academy of Sciences of the United States of America. December 1991, 88 (24): 11281–4. Bibcode:1991PNAS...8811281H. PMC 53118 . PMID 1837147. doi:10.1073/pnas.88.24.11281.
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核形蟲與泉生蟲（英语：Fonticula）都沒有幾丁質組成的細胞壁，具有圓盤狀的粒線體皺褶，以變形蟲的型態生長，以吞噬作用取得養分，基因組中缺少第二型（Division II）幾丁質合成酶（英语：chitin synthetase）的基因，這些特徵都與真菌不同。隱真菌門雖然也有許多物種缺乏細胞壁，但它們仍有第二型幾丁質合成酶的基因，細胞壁的缺乏可能是該演化支分支以後才丟失的特徵^[2]
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