Deep biosphere (English Wikipedia)

Analysis of information sources in references of the Wikipedia article "Deep biosphere" in English language version.

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60doi.org

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Tamburini, Christian; Boutrif, Mehdi; Garel, Marc; Colwell, Rita R.; Deming, Jody W. (May 2013). "Prokaryotic responses to hydrostatic pressure in the ocean - a review" (PDF). Environmental Microbiology. 15 (5): 1262–1274. Bibcode:2013EnvMi..15.1262T. doi:10.1111/1462-2920.12084. PMID 23419081.

bbc.com

Amos, Jonathan (10 December 2018). "The vast scale of life beneath our feet". BBC News. Retrieved 14 July 2019.

berkeley.edu

Sanders, Robert (5 May 2005). "Proteomics brings researchers closer to understanding microbes that produce acid mine drainage" (Press release). University of California Berkeley. Retrieved 19 July 2019.

deepcarbon.net

Deep Carbon Observatory (2019). Deep Carbon Observatory: A Decade of Discovery. Washington, DC. doi:10.17863/CAM.44064. Retrieved 13 December 2019.{{cite book}}: CS1 maint: location missing publisher (link)
"Deep-Sea Microbes Prefer High-Pressure Lifestyles". Deep Carbon Observatory. 23 July 2019. Archived from the original on 15 November 2019. Retrieved 15 November 2019.
"The PUSH for High-Pressure Microbiology". Deep Carbon Observatory. 30 September 2019. Archived from the original on 15 November 2019. Retrieved 15 November 2019.
Collins, Terry; Pratt, Katie (10 December 2018). "Life in deep Earth totals 15 to 23 billion tonnes of carbon—hundreds of times more than humans" (Press release). Deep Carbon Observatory. Archived from the original on 30 December 2018. Retrieved 14 July 2019.
"Deep life not limited to microbes: Earthquakes move surface animals to the deep" (Press release). Deep Carbon Observatory. 4 March 2019. Archived from the original on 4 December 2022. Retrieved 14 July 2019.
"World's Oldest Groundwater Supports Life Through Water-Rock Chemistry". Deep Carbon Observatory. 29 July 2019. Archived from the original on 10 September 2019. Retrieved 15 November 2019.

doi.org

Deep Carbon Observatory (2019). Deep Carbon Observatory: A Decade of Discovery. Washington, DC. doi:10.17863/CAM.44064. Retrieved 13 December 2019.{{cite book}}: CS1 maint: location missing publisher (link)
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Hoehler, Tori M.; Jorgensen, Bo Barker (16 January 2013). "Microbial life under extreme energy limitation". Nature Reviews Microbiology. 11 (2): 83–94. Bibcode:2013NatMb..11...83C. doi:10.1038/nrmicro2939. hdl:2060/20150018056. PMID 23321532. S2CID 461070.
Bar-On, Yinon M.; Phillips, Rob; Milo, Ron (19 June 2018). "The biomass distribution on Earth". Proceedings of the National Academy of Sciences. 115 (25): 6506–6511. Bibcode:2018PNAS..115.6506B. doi:10.1073/pnas.1711842115. PMC 6016768. PMID 29784790.
Gold, Thomas (1992). "The Deep, Hot Biosphere". Proc Natl Acad Sci. 89 (13): 6045–6049. Bibcode:1992PNAS...89.6045G. doi:10.1073/pnas.89.13.6045. PMC 49434. PMID 1631089.
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Fredrickson, James K.; Onstott, Tullis C. (1996). "Microbes Deep inside the Earth". Scientific American. 275 (4): 68–73. Bibcode:1996SciAm.275d..68F. doi:10.1038/scientificamerican1096-68. JSTOR 24993405. PMID 8797299.
Colwell, F. S.; D'Hondt, S. (13 February 2013). "Nature and Extent of the Deep Biosphere". Reviews in Mineralogy and Geochemistry. 75 (1): 547–574. Bibcode:2013RvMG...75..547C. doi:10.2138/rmg.2013.75.17.
Colman, Daniel (3 July 2017). "The deep, hot biosphere: Twenty-five years of retrospection". PNAS. 114 (27): 6895–6903. Bibcode:2017PNAS..114.6895C. doi:10.1073/pnas.1701266114. PMC 5502609. PMID 28674200.
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Itävaara, Merja; Ahonen, Lasse; Numminen, Mikko; Sohlberg, Elina; Kietäväinen, Riikka; Miettinen, Hanna (2015). "Microbiome composition and geochemical characteristics of deep subsurface high-pressure environment, Pyhäsalmi mine Finland". Frontiers in Microbiology. 6: 1203. doi:10.3389/fmicb.2015.01203. ISSN 1664-302X. PMC 4626562. PMID 26579109.
Mangelsdorf, Kai; Kallmeyer, Jens (10 September 2010). "Integration of Deep Biosphere Research into the International Continental Scientific Drilling Program". Scientific Drilling. 10 (10, September 2010): 46–55. doi:10.2204/iodp.sd.10.0.2010.
Becker, Keir; Davis, Earl E. (31 October 2005). "A review of CORK designs and operations during the Ocean Drilling Program". Proceedings of the Integrated Ocean Drilling Program. Proceedings of the IODP. 301. doi:10.2204/iodp.proc.301.104.2005.
Kulin, Ian; Riedel, Michael; Klaus, Adam (2013). "Simple cabled instrument for measuring Parameters In situ (SCIMPI) and Hole 858G CORK replacement". IODP Scientific Prospectus. 341S. doi:10.2204/iodp.sp.341S.2013.
Purkamo, Lotta; Bomberg, Malin; Nyyssönen, Mari; Kukkonen, Ilmo; Ahonen, Lasse; Kietäväinen, Riikka; Itävaara, Merja (2013). "Dissecting the deep biosphere: retrieving authentic microbial communities from packer-isolated deep crystalline bedrock fracture zones". FEMS Microbiology Ecology. 85 (2): 324–337. Bibcode:2013FEMME..85..324P. doi:10.1111/1574-6941.12126. ISSN 1574-6941. PMID 23560597.
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Orell, Alvaro; Fröls, Sabrina; Albers, Sonja-Verena (8 September 2013). "Archaeal Biofilms: The Great Unexplored". Annual Review of Microbiology. 67 (1): 337–354. doi:10.1146/annurev-micro-092412-155616. PMID 23808336.
Tsang, Man-Yin; Inagaki, Fumio (2020). "Microbial Life Deep Under the Seafloor—A Story of Not Giving Up". Frontiers for Young Minds. 8. doi:10.3389/frym.2020.00070. S2CID 218981468.
Bowles, Marshall W.; Mogollón, José M.; Kasten, Sabine; Zabel, Matthias; Hinrichs, Kai-Uwe (23 May 2014). "Global rates of marine sulfate reduction and implications for sub–sea-floor metabolic activities". Science. 344 (6186): 889–891. Bibcode:2014Sci...344..889B. doi:10.1126/science.1249213. ISSN 0036-8075. PMID 24812207. S2CID 25475098.
Jørgensen, Bo Barker (April 1982). "Mineralization of organic matter in the sea bed—the role of sulphate reduction". Nature. 296 (5858): 643–645. Bibcode:1982Natur.296..643J. doi:10.1038/296643a0. ISSN 0028-0836. S2CID 4308770.
Jørgensen, Bo Barker; Kasten, Sabine (2006), "Sulfur Cycling and Methane Oxidation", Marine Geochemistry, Berlin/Heidelberg: Springer-Verlag, pp. 271–309, doi:10.1007/3-540-32144-6_8, ISBN 3-540-32143-8, retrieved 18 May 2022
Orcutt, B. N.; Sylvan, J. B.; Knab, N. J.; Edwards, K. J. (6 June 2011). "Microbial Ecology of the Dark Ocean above, at, and below the Seafloor". Microbiology and Molecular Biology Reviews. 75 (2): 361–422. doi:10.1128/MMBR.00039-10. PMC 3122624. PMID 21646433.
Nealson, Kenneth H. (March 2003). "Harnessing microbial appetites for remediation". Nature Biotechnology. 21 (3): 243–244. doi:10.1038/nbt0303-243. PMID 12610569. S2CID 38153041.
Jørgensen, Bo Barker; Boetius, Antje (October 2007). "Feast and famine — microbial life in the deep-sea bed". Nature Reviews Microbiology. 5 (10): 770–781. doi:10.1038/nrmicro1745. PMID 17828281. S2CID 22970703.
Bender, Michael L.; Heggie, David T. (May 1984). "Fate of organic carbon reaching the deep sea floor: a status report". Geochimica et Cosmochimica Acta. 48 (5): 977–986. Bibcode:1984GeCoA..48..977B. doi:10.1016/0016-7037(84)90189-3.
Schrenk, Matthew O.; Huber, Julie A.; Edwards, Katrina J. (January 2010). "Microbial Provinces in the Subseafloor". Annual Review of Marine Science. 2 (1): 279–304. Bibcode:2010ARMS....2..279S. doi:10.1146/annurev-marine-120308-081000. PMID 21141666.
Rothschild, Lynn J.; Mancinelli, Rocco L. (February 2001). "Life in extreme environments". In Yamagishi, Akihiko; Kakegawa, Takeshi; Usui, Tomhiro (eds.). Astrobiology : from the origins of life to the search for extraterrestrial intelligence. Vol. 409. Singapore: Springer. pp. 1092–1101. doi:10.1038/35059215. ISBN 978-981-13-3639-3. PMID 11234023. S2CID 529873. {{cite book}}: |journal= ignored (help)
Cario, Anaïs; Oliver, Gina C.; Rogers, Karyn L. (4 September 2019). "Exploring the Deep Marine Biosphere: Challenges, Innovations, and Opportunities". Frontiers in Earth Science. 7: 225. Bibcode:2019FrEaS...7..225C. doi:10.3389/feart.2019.00225.
Tamburini, Christian; Boutrif, Mehdi; Garel, Marc; Colwell, Rita R.; Deming, Jody W. (May 2013). "Prokaryotic responses to hydrostatic pressure in the ocean - a review" (PDF). Environmental Microbiology. 15 (5): 1262–1274. Bibcode:2013EnvMi..15.1262T. doi:10.1111/1462-2920.12084. PMID 23419081.
Heuer, Verena; Lever, Mark; Morono, Yuki; Teske, Andreas (1 March 2019). "The Limits of Life and the Biosphere in Earth's Interior". Oceanography. 32 (1): 208–211. doi:10.5670/oceanog.2019.147.
McKay, C. P. (9 June 2014). "Requirements and limits for life in the context of exoplanets". Proceedings of the National Academy of Sciences. 111 (35): 12628–12633. Bibcode:2014PNAS..11112628M. doi:10.1073/pnas.1304212111. PMC 4156692. PMID 24927538.
Takai, Ken (2019). "Limits of Terrestrial Life and Biosphere". Astrobiology. pp. 323–344. doi:10.1007/978-981-13-3639-3_20. ISBN 978-981-13-3638-6. S2CID 134158036.
Colman, Daniel R.; Poudel, Saroj; Stamps, Blake W.; Boyd, Eric S.; Spear, John R. (3 July 2017). "The deep, hot biosphere: Twenty-five years of retrospection". Proceedings of the National Academy of Sciences. 114 (27): 6895–6903. Bibcode:2017PNAS..114.6895C. doi:10.1073/pnas.1701266114. PMC 5502609. PMID 28674200.
Biddle, Jennifer F.; Sylvan, Jason B.; Brazelton, William J.; Tully, Benjamin J.; Edwards, Katrina J.; Moyer, Craig L.; Hedelberg, John F.; Nelson, William C. (2012). "Prospects for the study of evolution in the deep biosphere". Frontiers in Microbiology. 2: 285. doi:10.3389/fmicb.2011.00285. PMC 3265032. PMID 22319515.
Tsang, Man-Yin; Bowden, Stephen A.; Wang, Zhibin; Mohammed, Abdalla; Tonai, Satoshi; Muirhead, David; Yang, Kiho; Yamamoto, Yuzuru; Kamiya, Nana; Okutsu, Natsumi; Hirose, Takehiro; Kars, Myriam; Schubotz, Florence; Ljiri, Akira; Yamada, Yasuhiro; Kubo, Yusuke; Morono, Yuki; Inagaki, Fumio; Heuer, Verena B.; Hinrichs, Kai-Uwe (1 February 2020). "Hot fluids, burial metamorphism and thermal histories in the underthrust sediments at IODP 370 site C0023, Nankai Accretionary Complex". Marine and Petroleum Geology. 112: 104080. Bibcode:2020MarPG.11204080T. doi:10.1016/j.marpetgeo.2019.104080. hdl:2164/13157. ISSN 0264-8172. S2CID 207994536.
Petro, C; Starnawski, P; Schramm, A; Kjeldsen, KU (12 June 2017). "Microbial community assembly in marine sediments". Aquatic Microbial Ecology. 79 (3): 177–195. doi:10.3354/ame01826.
Parkes, R. John; Cragg, Barry; Roussel, Erwan; Webster, Gordon; Weightman, Andrew; Sass, Henrik (June 2014). "A review of prokaryotic populations and processes in sub-seafloor sediments, including biosphere:geosphere interactions". Marine Geology. 352: 409–425. Bibcode:2014MGeol.352..409P. doi:10.1016/j.margeo.2014.02.009.
Hug, Laura A.; Baker, Brett J.; Anantharaman, Karthik; Brown, Christopher T.; Probst, Alexander J.; Castelle, Cindy J.; Butterfield, Cristina N.; Hernsdorf, Alex W.; Amano, Yuki; Ise, Kotaro; Suzuki, Yohey; Dudek, Natasha; Relman, David A.; Finstad, Kari M.; Amundson, Ronald; Thomas, Brian C.; Banfield, Jillian F. (11 April 2016). "A new view of the tree of life". Nature Microbiology. 1 (5): 16048. doi:10.1038/NMICROBIOL.2016.48. PMID 27572647.
Lee, Yung Mi; Hwang, Kyuin; Lee, Jae Il; Kim, Mincheol; Hwang, Chung Yeon; Noh, Hyun-Ju; Choi, Hakkyum; Lee, Hong Kum; Chun, Jongsik; Hong, Soon Gyu; Shin, Seung Chul (29 November 2018). "Genomic Insight Into the Predominance of Candidate Phylum Atribacteria JS1 Lineage in Marine Sediments". Frontiers in Microbiology. 9: 2909. doi:10.3389/fmicb.2018.02909. PMC 6281690. PMID 30555444.
Orsi, William D. (2 July 2018). "Ecology and evolution of seafloor and subseafloor microbial communities". Nature Reviews Microbiology. 16 (11): 671–683. doi:10.1038/s41579-018-0046-8. PMID 29967420. S2CID 49559285.
MacLeod, Fraser; S. Kindler, Gareth; Lun Wong, Hon; Chen, Ray; P. Burns, Brendan (2019). "Asgard archaea: Diversity, function, and evolutionary implications in a range of microbiomes". AIMS Microbiology. 5 (1): 48–61. doi:10.3934/microbiol.2019.1.48. PMC 6646929. PMID 31384702.
Magnabosco, C.; Lin, L.-H.; Dong, H.; Bomberg, M.; Ghiorse, W.; Stan-Lotter, H.; Pedersen, K.; Kieft, T. L.; van Heerden, E.; Onstott, T. C. (24 September 2018). "The biomass and biodiversity of the continental subsurface". Nature Geoscience. 11 (10): 707–717. Bibcode:2018NatGe..11..707M. doi:10.1038/s41561-018-0221-6. S2CID 133768246.
Itävaara, Merja; Vikman, Minna; Salavirta, Heikki; Nyyssönen, Mari; Miettinen, Hanna; Bomberg, Malin; Sohlberg, Elina (2015). "Revealing the unexplored fungal communities in deep groundwater of crystalline bedrock fracture zones in Olkiluoto, Finland". Frontiers in Microbiology. 6: 573. doi:10.3389/fmicb.2015.00573. ISSN 1664-302X. PMC 4460562. PMID 26106376.
Bomberg, Malin; Itävaara, Merja; Kukkonen, Ilmo; Sohlberg, Elina; Miettinen, Hanna; Kietäväinen, Riikka; Purkamo, Lotta (1 August 2018). "Diversity and functionality of archaeal, bacterial and fungal communities in deep Archaean bedrock groundwater". FEMS Microbiology Ecology. 94 (8). doi:10.1093/femsec/fiy116. ISSN 0168-6496. PMID 29893836.
Borgonie, G.; Linage-Alvarez, B.; Ojo, A. O.; Mundle, S.O.C.; Freese, L B.; Van Rooyen, C.; Kuloyo, O.; Albertyn, J.; Pohl, C.; Cason, E. D.; Vermeulen, J.; Pienaar, C.; Litthauer, D.; Van Niekerk, H.; Van Eeden, J.; Lollar, B. Sherwood.; Onstott, T. C.; Van Heerden, E. (24 November 2015). "Eukaryotic opportunists dominate the deep-subsurface biosphere in South Africa". Nature Communications. 6 (1): 8952. Bibcode:2015NatCo...6.8952B. doi:10.1038/ncomms9952. PMC 4673884. PMID 26597082.
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Drake, Henrik; Åström, Mats E.; Heim, Christine; Broman, Curt; Åström, Jan; Whitehouse, Martin; Ivarsson, Magnus; Siljeström, Sandra; Sjövall, Peter (7 May 2015). "Extreme 13 C depletion of carbonates formed during oxidation of biogenic methane in fractured granite". Nature Communications. 6 (1): 7020. Bibcode:2015NatCo...6.7020D. doi:10.1038/ncomms8020. ISSN 2041-1723. PMC 4432592. PMID 25948095.
Drake, Henrik; Ivarsson, Magnus; Bengtson, Stefan; Heim, Christine; Siljeström, Sandra; Whitehouse, Martin J.; Broman, Curt; Belivanova, Veneta; Åström, Mats E. (4 July 2017). "Anaerobic consortia of fungi and sulfate reducing bacteria in deep granite fractures". Nature Communications. 8 (1): 55. Bibcode:2017NatCo...8...55D. doi:10.1038/s41467-017-00094-6. ISSN 2041-1723. PMC 5496868. PMID 28676652.

dx.doi.org

Bowles, Marshall W.; Mogollón, José M.; Kasten, Sabine; Zabel, Matthias; Hinrichs, Kai-Uwe (23 May 2014). "Global rates of marine sulfate reduction and implications for sub–sea-floor metabolic activities". Science. 344 (6186): 889–891. Bibcode:2014Sci...344..889B. doi:10.1126/science.1249213. ISSN 0036-8075. PMID 24812207. S2CID 25475098.
Jørgensen, Bo Barker; Kasten, Sabine (2006), "Sulfur Cycling and Methane Oxidation", Marine Geochemistry, Berlin/Heidelberg: Springer-Verlag, pp. 271–309, doi:10.1007/3-540-32144-6_8, ISBN 3-540-32143-8, retrieved 18 May 2022

elsevier.com

linkinghub.elsevier.com

Bender, Michael L.; Heggie, David T. (May 1984). "Fate of organic carbon reaching the deep sea floor: a status report". Geochimica et Cosmochimica Acta. 48 (5): 977–986. Bibcode:1984GeCoA..48..977B. doi:10.1016/0016-7037(84)90189-3.

handle.net

hdl.handle.net

Heuer, Verena B.; Inagaki, Fumio; Morono, Yuki; Kubo, Yusuke; Spivack, Arthur J.; Viehweger, Bernhard; Treude, Tina; Beulig, Felix; Schubotz, Florence; Tonai, Satoshi; Bowden, Stephen A. (4 December 2020). "Temperature limits to deep subseafloor life in the Nankai Trough subduction zone". Science. 370 (6521): 1230–1234. Bibcode:2020Sci...370.1230H. doi:10.1126/science.abd7934. hdl:2164/15700. ISSN 0036-8075. PMID 33273103. S2CID 227257205.
Hoehler, Tori M.; Jorgensen, Bo Barker (16 January 2013). "Microbial life under extreme energy limitation". Nature Reviews Microbiology. 11 (2): 83–94. Bibcode:2013NatMb..11...83C. doi:10.1038/nrmicro2939. hdl:2060/20150018056. PMID 23321532. S2CID 461070.
Tsang, Man-Yin; Bowden, Stephen A.; Wang, Zhibin; Mohammed, Abdalla; Tonai, Satoshi; Muirhead, David; Yang, Kiho; Yamamoto, Yuzuru; Kamiya, Nana; Okutsu, Natsumi; Hirose, Takehiro; Kars, Myriam; Schubotz, Florence; Ljiri, Akira; Yamada, Yasuhiro; Kubo, Yusuke; Morono, Yuki; Inagaki, Fumio; Heuer, Verena B.; Hinrichs, Kai-Uwe (1 February 2020). "Hot fluids, burial metamorphism and thermal histories in the underthrust sediments at IODP 370 site C0023, Nankai Accretionary Complex". Marine and Petroleum Geology. 112: 104080. Bibcode:2020MarPG.11204080T. doi:10.1016/j.marpetgeo.2019.104080. hdl:2164/13157. ISSN 0264-8172. S2CID 207994536.

harvard.edu

ui.adsabs.harvard.edu

Heuer, Verena B.; Inagaki, Fumio; Morono, Yuki; Kubo, Yusuke; Spivack, Arthur J.; Viehweger, Bernhard; Treude, Tina; Beulig, Felix; Schubotz, Florence; Tonai, Satoshi; Bowden, Stephen A. (4 December 2020). "Temperature limits to deep subseafloor life in the Nankai Trough subduction zone". Science. 370 (6521): 1230–1234. Bibcode:2020Sci...370.1230H. doi:10.1126/science.abd7934. hdl:2164/15700. ISSN 0036-8075. PMID 33273103. S2CID 227257205.
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ncbi.nlm.nih.gov

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